| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788226
Identifier: 91788226
GI number: 91788226
Start: 2454320
End: 2455015
Strand: Reverse
Name: 91788226
Synonym: Bpro_2359
Alternate gene names: NA
Gene position: 2455015-2454320 (Counterclockwise)
Preceding gene: 91788228
Following gene: 91788220
Centisome position: 47.21
GC content: 61.21
Gene sequence:
>696_bases ATGCCTTGTTCTGTGGTCTGTGGCGCGGTGCTGCCACGGTATGAACTGATTATCGGGCACGGGCACTACTCGCCCAAAAC ACCGGAAGCAATCAGCGATCACCATTGGCGCGGCATGGCATTTGCTTGCATGAGCGCCGGCTTCCCTCCACGGCATTGCC CTTCACAGGAGATCGAGATGTTCGGTTTAACGTCCCTGGGTATCGTCCACACCGCGATCAGCCTGGTTGCTGTCGCTGCC GGTGTAATGGCCTTTTTTCGCTACAAGGAAATTCTGGACAGGACCACGCTGGGCAAGGTCTATGTGGTCACCACCATCGT CACCTGCCTGACCGGCTTTGGCATCTTCCAGCACGGCGGGTTCGGCAAACCCCATGCACTGGGCATTGTCACGCTGCTGG TGTTGCTGCTGGCGGCCGTGGCGGGCCGCACCCGGCTGCTGGGCCGCGCCTCGCCCTACGTGGAAACCGTCAGCTACTCA GCGACTTTTCTCTTTCACCTGATCCCCGCCATCACTGAAACATCGACCCGCCTGCCGCTGGGCGCACCTTTGCTGGCCAA CGCGGAAGCGCCGGAACTGAAGATGGTGACCGGGGTGCTGTTTGTGCTGTTCTTCATTGGCGCGACACTGCAGGCACGAC GTTTGCACAGCAGGAATGCCGCGCTGGCCGGCGCACTGGTGGCGCCTGCTCTCTGA
Upstream 100 bases:
>100_bases CGTTCTCGTTTGATGTATTTGCGGATGTCGTGCTTCGCGGCGTCCAGCAGGCGGTCGCGGTTCTTGCCCTCAATAGCGAG CAGGTAGGTTTTTCTCATGT
Downstream 100 bases:
>100_bases GCTGCGAAGAGCGTCAGGCGGCCAGCAGCACCTTGTCAATTGCCTCGTGCAGGTGCTGCAGGCCAAATGAAACATCAGTG ACCACGCCATTGACATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPCSVVCGAVLPRYELIIGHGHYSPKTPEAISDHHWRGMAFACMSAGFPPRHCPSQEIEMFGLTSLGIVHTAISLVAVAA GVMAFFRYKEILDRTTLGKVYVVTTIVTCLTGFGIFQHGGFGKPHALGIVTLLVLLLAAVAGRTRLLGRASPYVETVSYS ATFLFHLIPAITETSTRLPLGAPLLANAEAPELKMVTGVLFVLFFIGATLQARRLHSRNAALAGALVAPAL
Sequences:
>Translated_231_residues MPCSVVCGAVLPRYELIIGHGHYSPKTPEAISDHHWRGMAFACMSAGFPPRHCPSQEIEMFGLTSLGIVHTAISLVAVAA GVMAFFRYKEILDRTTLGKVYVVTTIVTCLTGFGIFQHGGFGKPHALGIVTLLVLLLAAVAGRTRLLGRASPYVETVSYS ATFLFHLIPAITETSTRLPLGAPLLANAEAPELKMVTGVLFVLFFIGATLQARRLHSRNAALAGALVAPAL >Mature_230_residues PCSVVCGAVLPRYELIIGHGHYSPKTPEAISDHHWRGMAFACMSAGFPPRHCPSQEIEMFGLTSLGIVHTAISLVAVAAG VMAFFRYKEILDRTTLGKVYVVTTIVTCLTGFGIFQHGGFGKPHALGIVTLLVLLLAAVAGRTRLLGRASPYVETVSYSA TFLFHLIPAITETSTRLPLGAPLLANAEAPELKMVTGVLFVLFFIGATLQARRLHSRNAALAGALVAPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24623; Mature: 24492
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCSVVCGAVLPRYELIIGHGHYSPKTPEAISDHHWRGMAFACMSAGFPPRHCPSQEIEM CCCHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHH FGLTSLGIVHTAISLVAVAAGVMAFFRYKEILDRTTLGKVYVVTTIVTCLTGFGIFQHGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC FGKPHALGIVTLLVLLLAAVAGRTRLLGRASPYVETVSYSATFLFHLIPAITETSTRLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAPLLANAEAPELKMVTGVLFVLFFIGATLQARRLHSRNAALAGALVAPAL CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure PCSVVCGAVLPRYELIIGHGHYSPKTPEAISDHHWRGMAFACMSAGFPPRHCPSQEIEM CCHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHH FGLTSLGIVHTAISLVAVAAGVMAFFRYKEILDRTTLGKVYVVTTIVTCLTGFGIFQHGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC FGKPHALGIVTLLVLLLAAVAGRTRLLGRASPYVETVSYSATFLFHLIPAITETSTRLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAPLLANAEAPELKMVTGVLFVLFFIGATLQARRLHSRNAALAGALVAPAL CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA