| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bugT [H]
Identifier: 91788218
GI number: 91788218
Start: 2448421
End: 2449440
Strand: Reverse
Name: bugT [H]
Synonym: Bpro_2351
Alternate gene names: 91788218
Gene position: 2449440-2448421 (Counterclockwise)
Preceding gene: 91788219
Following gene: 91788216
Centisome position: 47.1
GC content: 64.61
Gene sequence:
>1020_bases ATGACAACTCAAACGACCACCCTCAACACGAAACAAACGACCCGGCGCCAGACCCTGCAACGCCTGGGTGCCCTGGCTTT TAGCAGCACGCTCCTGAGCACACCGCTGGCCCTGCTGGCCCAGACCACCGACAAGGTGGTGCGCTTCATCCTGCCGGTCG GCGCAGGCTCCGGCGTGGACACCATTGTTCGCGCCGCCAGCGTTGCGCTGGGCAAGGCGCTGGGCCACCCCGTGGTGATC GAAAACCAGCCCGGTGCCGGTGGCATCGTCGGCACGGCCGCCATGATCAAGACCGCCCCCGACGGCATGACATTGAGCGT GGTGTCCAACAACCACGTGATCTACCCCAGCGTCTACAAGTCGCTGCCGTTTGACCCGATCAACGACATCACGCCCATCA GCGTGATCGGCAGCACGCCGATGGTGCTGGTGGTCAACCCGGCCAAGGTCGCGGCCACCAATGTGAAAGAGCTGGTGGCC CTGCTCAAGGCCAAACCCGACGCCTACAACTACGCCTCGTCGGGCAACGGCACCATCCTGCATCTGGCGGCGGAAATGTT TCTGGACGAGGCCCAGGTCAAGGCCAAACACATCCCCTACAAAGGGGTGGGCCCGATGGTGGCCGACCTGATTGGCGGGC AGGTCGAGATGGGTGTACTGGCGCTGCCTTCGATCCAGGCACACCTCAAGAGCGGCGCCCTGCGCGCCATCGGCGTCGGT GGCAGCGCCCGCGTGGCTGCCGCACCGGACATCCCCACCCTGGCCGAACAGGGCCTGGGCAACTACAACCTGGAAGGCTG GTTCGCCGTGATCGGCCCGGCGAAATTGCCGGCAGCAGAGGTCAAGCGCATCCAGGCCGCCGTGGTCGCCGCCTACGCCA CACCCGAAGTGAAAGAGGCCATGGCCAAACAGGGCAATACCATCAACCCGACCAGCCCGGAAGTGGCCGCCCAGTTTTTC CGCAGCGAGTTGGTGAAGTACGCGAAGCTGGTGAAAAAGGCGGGCGTCGAACTGCAGTAA
Upstream 100 bases:
>100_bases GGCTACAGCACCAGCGCCATCGAGAATTTGCATTCGCAGGCGGCCGTGAGCTGAACGGCCAAACGATTTCAGCAACCCAC CCCAAAGACGGAGACAAAAA
Downstream 100 bases:
>100_bases GACCCACGTGCATGCGGCCGTTGCATCGTTCAGGACAGGAACGGTTCTGCAGTTGCTATCTTTTTAATAGCTGCTTGCGC TCGTCACTACTGGGCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTTQTTTLNTKQTTRRQTLQRLGALAFSSTLLSTPLALLAQTTDKVVRFILPVGAGSGVDTIVRAASVALGKALGHPVVI ENQPGAGGIVGTAAMIKTAPDGMTLSVVSNNHVIYPSVYKSLPFDPINDITPISVIGSTPMVLVVNPAKVAATNVKELVA LLKAKPDAYNYASSGNGTILHLAAEMFLDEAQVKAKHIPYKGVGPMVADLIGGQVEMGVLALPSIQAHLKSGALRAIGVG GSARVAAAPDIPTLAEQGLGNYNLEGWFAVIGPAKLPAAEVKRIQAAVVAAYATPEVKEAMAKQGNTINPTSPEVAAQFF RSELVKYAKLVKKAGVELQ
Sequences:
>Translated_339_residues MTTQTTTLNTKQTTRRQTLQRLGALAFSSTLLSTPLALLAQTTDKVVRFILPVGAGSGVDTIVRAASVALGKALGHPVVI ENQPGAGGIVGTAAMIKTAPDGMTLSVVSNNHVIYPSVYKSLPFDPINDITPISVIGSTPMVLVVNPAKVAATNVKELVA LLKAKPDAYNYASSGNGTILHLAAEMFLDEAQVKAKHIPYKGVGPMVADLIGGQVEMGVLALPSIQAHLKSGALRAIGVG GSARVAAAPDIPTLAEQGLGNYNLEGWFAVIGPAKLPAAEVKRIQAAVVAAYATPEVKEAMAKQGNTINPTSPEVAAQFF RSELVKYAKLVKKAGVELQ >Mature_338_residues TTQTTTLNTKQTTRRQTLQRLGALAFSSTLLSTPLALLAQTTDKVVRFILPVGAGSGVDTIVRAASVALGKALGHPVVIE NQPGAGGIVGTAAMIKTAPDGMTLSVVSNNHVIYPSVYKSLPFDPINDITPISVIGSTPMVLVVNPAKVAATNVKELVAL LKAKPDAYNYASSGNGTILHLAAEMFLDEAQVKAKHIPYKGVGPMVADLIGGQVEMGVLALPSIQAHLKSGALRAIGVGG SARVAAAPDIPTLAEQGLGNYNLEGWFAVIGPAKLPAAEVKRIQAAVVAAYATPEVKEAMAKQGNTINPTSPEVAAQFFR SELVKYAKLVKKAGVELQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35186; Mature: 35055
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTTTLNTKQTTRRQTLQRLGALAFSSTLLSTPLALLAQTTDKVVRFILPVGAGSGVD CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TIVRAASVALGKALGHPVVIENQPGAGGIVGTAAMIKTAPDGMTLSVVSNNHVIYPSVYK HHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHEECCCCEEEEEECCCEEECHHHHH SLPFDPINDITPISVIGSTPMVLVVNPAKVAATNVKELVALLKAKPDAYNYASSGNGTIL CCCCCCCCCCCCEEEECCCCEEEEECCHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEEE HLAAEMFLDEAQVKAKHIPYKGVGPMVADLIGGQVEMGVLALPSIQAHLKSGALRAIGVG EHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECEEECCHHHHHHHCCCEEEEECC GSARVAAAPDIPTLAEQGLGNYNLEGWFAVIGPAKLPAAEVKRIQAAVVAAYATPEVKEA CCCEEEECCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH MAKQGNTINPTSPEVAAQFFRSELVKYAKLVKKAGVELQ HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTQTTTLNTKQTTRRQTLQRLGALAFSSTLLSTPLALLAQTTDKVVRFILPVGAGSGVD CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TIVRAASVALGKALGHPVVIENQPGAGGIVGTAAMIKTAPDGMTLSVVSNNHVIYPSVYK HHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHEECCCCEEEEEECCCEEECHHHHH SLPFDPINDITPISVIGSTPMVLVVNPAKVAATNVKELVALLKAKPDAYNYASSGNGTIL CCCCCCCCCCCCEEEECCCCEEEEECCHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEEE HLAAEMFLDEAQVKAKHIPYKGVGPMVADLIGGQVEMGVLALPSIQAHLKSGALRAIGVG EHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECEEECCHHHHHHHCCCEEEEECC GSARVAAAPDIPTLAEQGLGNYNLEGWFAVIGPAKLPAAEVKRIQAAVVAAYATPEVKEA CCCEEEECCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH MAKQGNTINPTSPEVAAQFFRSELVKYAKLVKKAGVELQ HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]