| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yggX [C]
Identifier: 91788213
GI number: 91788213
Start: 2443352
End: 2443624
Strand: Reverse
Name: yggX [C]
Synonym: Bpro_2344
Alternate gene names: 91788213
Gene position: 2443624-2443352 (Counterclockwise)
Preceding gene: 91788215
Following gene: 91788212
Centisome position: 46.99
GC content: 60.81
Gene sequence:
>273_bases ATGGCACGCATGGTCAAATGCATCAAACTGGGCAGGGAAGCCGAAGGTCTCGACTTTCCCCCCTACCCCGGCCCGCTGGG CAAGCGCCTCTGGGAAGAAGTCAGCAAGGAGGCCTGGGCCGATTGGATGAAACAGCAAACCATGCTGGTCAATGAAAACC GGCTCAACCTGGCCGATGCCCGCGCCCGCCAATACCTGGCCCGGCAGATGGAAAAGCATTTTTTCGGGGACGGCGCTGAC GCCGTCCAAGGCTACGTACCTCCCAGCGCATGA
Upstream 100 bases:
>100_bases GCGGGAAACTGGATTCTGGAAGCAGCCATTGAAAACAGGAACGAATAAGAAATCAGCTTGTTATTCCTAAAACATCTTAT AACCACGAAAGAATATTCAA
Downstream 100 bases:
>100_bases GCGAAGCCATGCGCTGCCAAAAAAAATGCTTTCGCCAAAAGCATTTGGACCTCGGCAAAGCCGAGGTCGGCCGCATGAGC AAAGCGATGTGCGGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MARMVKCIKLGREAEGLDFPPYPGPLGKRLWEEVSKEAWADWMKQQTMLVNENRLNLADARARQYLARQMEKHFFGDGAD AVQGYVPPSA
Sequences:
>Translated_90_residues MARMVKCIKLGREAEGLDFPPYPGPLGKRLWEEVSKEAWADWMKQQTMLVNENRLNLADARARQYLARQMEKHFFGDGAD AVQGYVPPSA >Mature_89_residues ARMVKCIKLGREAEGLDFPPYPGPLGKRLWEEVSKEAWADWMKQQTMLVNENRLNLADARARQYLARQMEKHFFGDGADA VQGYVPPSA
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=48.2758620689655, Blast_Score=95, Evalue=9e-22,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 10282; Mature: 10151
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMVKCIKLGREAEGLDFPPYPGPLGKRLWEEVSKEAWADWMKQQTMLVNENRLNLADA CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RARQYLARQMEKHFFGDGADAVQGYVPPSA HHHHHHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure ARMVKCIKLGREAEGLDFPPYPGPLGKRLWEEVSKEAWADWMKQQTMLVNENRLNLADA HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RARQYLARQMEKHFFGDGADAVQGYVPPSA HHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA