| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cysNC [H]
Identifier: 91788204
GI number: 91788204
Start: 2432631
End: 2433947
Strand: Reverse
Name: cysNC [H]
Synonym: Bpro_2335
Alternate gene names: 91788204
Gene position: 2433947-2432631 (Counterclockwise)
Preceding gene: 91788205
Following gene: 91788203
Centisome position: 46.8
GC content: 63.78
Gene sequence:
>1317_bases ATGAGCACGCCCACTGTTGAAACCGTCAGCCTGACCACAGCTGCAACTGCCCAGGACACGCGTGCCGCCCTGCGTTTTGT CACCTGCGGCAGCGTCGATGATGGCAAGAGCACCCTGATTGGCCGCCTGCTGGTCGACAGCCGTGCCGTGCTGCAGGATC ACCTGGCCGGCGTGCAGCGCGGCGGTGAGACTGACCTGGCCCTGCTGACCGATGGCCTGTCTGCCGAGCGCGAACAGGGC ATCACCATTGACGTAGCCTACCGGTATTTCTCTACCGAGAGCCGCAAGTTCATCATTGCCGATGCCCCGGGCCACGAGCA ATACACCCGCAACATGGTCACTGCGGCATCGAGCGCCGATGCCGCAGTGGTGCTGGTTGATGCCACCAAACTGACTTGGG AGGCGCCTTCGCCCGAGCTGCTGCCGCAAACCCGCCGCCATTCGCTGCTGGTCGATCTGCTGCGCGTGCCGTCCATCGTC TTTGCCATCAACAAGCTCGACGCGGTTGCCAACCCGGCCCTGGCCTTCGCCCATATCAGCGCGGCCTTGAGCCAGTTTGC CAAGGAGGCGCAGATTCCGGTCAAGGCCATCGTGCCGGTGTCGGCCCTGATTGGCTACAACGTGGTGGATGCCCACCCCG GCTGGTGCGATTACCAGGGCCCCAGCCTGCTGGAGATTCTGGAGCACCTGCCGGCCACACCGGCCGATACGTCGGAGGCT TTTGCGTTTCCGGTGCAGTGGGTGGAGAAGTTTTCATCCAGCGCGGACACCTCGCAGGGACGACGTATCTTCTGGGGTCG CATTGCCAGCGGTGCAGTACAACCGGGCCAGCAGATTACCGTGCTGCCGGGTGGGAAAAGCGCCACAGTGGCCCAAGTAC TGGACCATACGCGCCAACCCAAGGCTGTATTGGCCGGGCACAGCGCCGGCATCATCCTGGACCGCGAACTGGACGTGTCA CGCGGTGACTGGCTGCTGGCGGAGGGCGGATTCGAGCCACCGCTGGGCGTGCGCGAAATCACCGCGGAAGTTGCCTGGAT GGACGACGAACCCCTGGTACCGGGCCGCATGTACTGGGCCTTGCAGGGCCACCGCTGGGTCAAGGCCAAAATCAAGCGTA TCGTCCACCAGGTAAACATCAATACCCTGGAGACCCACGACGCAACACACCTGGACGCGAACGCCATCGGTGTCGTCGAG TTGGCCCTGCTGGAGCCGATTCCGGCACGGCCTTACCTGCAGTCCCGCATCCTCGGCTCGCTGGTACTGGTGGACACGGC GTCGCACAAAACATCCGGCGCCGCACTGGTTCTTTAA
Upstream 100 bases:
>100_bases AAACGCTGGCCGCCGATGTCAGCGAGCGCGGCGCCACCCGCATGGACGACAAAACCTCCGATGCCTCCATGGAAAAGCGG AAAAAAGAAGGATATTTCTG
Downstream 100 bases:
>100_bases GCTGCCAAGGCCCTTTCAATTCACTGCTTCAACGCTGCTACTGGAAACCTCTTAAAATCAAGGGTTTCCACCGATCAGCC AATACAACATGACACACATC
Product: sulfate adenylyltransferase subunit 1
Products: NA
Alternate protein names: Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSTPTVETVSLTTAATAQDTRAALRFVTCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQRGGETDLALLTDGLSAEREQG ITIDVAYRYFSTESRKFIIADAPGHEQYTRNMVTAASSADAAVVLVDATKLTWEAPSPELLPQTRRHSLLVDLLRVPSIV FAINKLDAVANPALAFAHISAALSQFAKEAQIPVKAIVPVSALIGYNVVDAHPGWCDYQGPSLLEILEHLPATPADTSEA FAFPVQWVEKFSSSADTSQGRRIFWGRIASGAVQPGQQITVLPGGKSATVAQVLDHTRQPKAVLAGHSAGIILDRELDVS RGDWLLAEGGFEPPLGVREITAEVAWMDDEPLVPGRMYWALQGHRWVKAKIKRIVHQVNINTLETHDATHLDANAIGVVE LALLEPIPARPYLQSRILGSLVLVDTASHKTSGAALVL
Sequences:
>Translated_438_residues MSTPTVETVSLTTAATAQDTRAALRFVTCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQRGGETDLALLTDGLSAEREQG ITIDVAYRYFSTESRKFIIADAPGHEQYTRNMVTAASSADAAVVLVDATKLTWEAPSPELLPQTRRHSLLVDLLRVPSIV FAINKLDAVANPALAFAHISAALSQFAKEAQIPVKAIVPVSALIGYNVVDAHPGWCDYQGPSLLEILEHLPATPADTSEA FAFPVQWVEKFSSSADTSQGRRIFWGRIASGAVQPGQQITVLPGGKSATVAQVLDHTRQPKAVLAGHSAGIILDRELDVS RGDWLLAEGGFEPPLGVREITAEVAWMDDEPLVPGRMYWALQGHRWVKAKIKRIVHQVNINTLETHDATHLDANAIGVVE LALLEPIPARPYLQSRILGSLVLVDTASHKTSGAALVL >Mature_437_residues STPTVETVSLTTAATAQDTRAALRFVTCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQRGGETDLALLTDGLSAEREQGI TIDVAYRYFSTESRKFIIADAPGHEQYTRNMVTAASSADAAVVLVDATKLTWEAPSPELLPQTRRHSLLVDLLRVPSIVF AINKLDAVANPALAFAHISAALSQFAKEAQIPVKAIVPVSALIGYNVVDAHPGWCDYQGPSLLEILEHLPATPADTSEAF AFPVQWVEKFSSSADTSQGRRIFWGRIASGAVQPGQQITVLPGGKSATVAQVLDHTRQPKAVLAGHSAGIILDRELDVSR GDWLLAEGGFEPPLGVREITAEVAWMDDEPLVPGRMYWALQGHRWVKAKIKRIVHQVNINTLETHDATHLDANAIGVVEL ALLEPIPARPYLQSRILGSLVLVDTASHKTSGAALVL
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI223555963, Length=425, Percent_Identity=28.2352941176471, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI5729864, Length=425, Percent_Identity=28.2352941176471, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI4503475, Length=443, Percent_Identity=27.313769751693, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI4503471, Length=354, Percent_Identity=29.0960451977401, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI194018522, Length=305, Percent_Identity=28.8524590163934, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI46094014, Length=308, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI194018520, Length=305, Percent_Identity=28.8524590163934, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI194097354, Length=305, Percent_Identity=28.8524590163934, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI34147630, Length=318, Percent_Identity=27.6729559748428, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1789108, Length=432, Percent_Identity=42.3611111111111, Blast_Score=312, Evalue=3e-86, Organism=Escherichia coli, GI1790412, Length=329, Percent_Identity=26.1398176291793, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789737, Length=329, Percent_Identity=26.1398176291793, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI32566629, Length=436, Percent_Identity=27.5229357798165, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI115532067, Length=322, Percent_Identity=31.055900621118, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17552884, Length=433, Percent_Identity=27.7136258660508, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17569207, Length=433, Percent_Identity=27.7136258660508, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI115532065, Length=322, Percent_Identity=31.055900621118, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI32566303, Length=433, Percent_Identity=25.4041570438799, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI32566301, Length=146, Percent_Identity=37.6712328767123, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25141371, Length=308, Percent_Identity=25.3246753246753, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17556456, Length=324, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322937, Length=434, Percent_Identity=29.2626728110599, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6325337, Length=346, Percent_Identity=28.9017341040462, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6319594, Length=346, Percent_Identity=28.9017341040462, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6320377, Length=423, Percent_Identity=26.241134751773, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324761, Length=342, Percent_Identity=26.9005847953216, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24652838, Length=414, Percent_Identity=26.8115942028986, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI17137572, Length=414, Percent_Identity=26.8115942028986, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI45553807, Length=412, Percent_Identity=26.4563106796117, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI45553816, Length=412, Percent_Identity=26.4563106796117, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24651721, Length=412, Percent_Identity=26.4563106796117, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI17864154, Length=412, Percent_Identity=26.4563106796117, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI17137380, Length=341, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI45550900, Length=308, Percent_Identity=29.2207792207792, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI281363316, Length=259, Percent_Identity=30.1158301158301, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI17864358, Length=259, Percent_Identity=30.1158301158301, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19921738, Length=225, Percent_Identity=28.4444444444444, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 47059; Mature: 46928
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTVETVSLTTAATAQDTRAALRFVTCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQR CCCCCEEEEEEEEECCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGETDLALLTDGLSAEREQGITIDVAYRYFSTESRKFIIADAPGHEQYTRNMVTAASSAD CCCCCEEEEECCCCCHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC AAVVLVDATKLTWEAPSPELLPQTRRHSLLVDLLRVPSIVFAINKLDAVANPALAFAHIS EEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALSQFAKEAQIPVKAIVPVSALIGYNVVDAHPGWCDYQGPSLLEILEHLPATPADTSEA HHHHHHHHHHCCCEEEHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC FAFPVQWVEKFSSSADTSQGRRIFWGRIASGAVQPGQQITVLPGGKSATVAQVLDHTRQP EEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC KAVLAGHSAGIILDRELDVSRGDWLLAEGGFEPPLGVREITAEVAWMDDEPLVPGRMYWA CEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHEEEECCCCCCCCCEEEEE LQGHRWVKAKIKRIVHQVNINTLETHDATHLDANAIGVVELALLEPIPARPYLQSRILGS ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHCE LVLVDTASHKTSGAALVL EEEEECCCCCCCCCEEEC >Mature Secondary Structure STPTVETVSLTTAATAQDTRAALRFVTCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQR CCCCEEEEEEEEECCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGETDLALLTDGLSAEREQGITIDVAYRYFSTESRKFIIADAPGHEQYTRNMVTAASSAD CCCCCEEEEECCCCCHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC AAVVLVDATKLTWEAPSPELLPQTRRHSLLVDLLRVPSIVFAINKLDAVANPALAFAHIS EEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALSQFAKEAQIPVKAIVPVSALIGYNVVDAHPGWCDYQGPSLLEILEHLPATPADTSEA HHHHHHHHHHCCCEEEHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC FAFPVQWVEKFSSSADTSQGRRIFWGRIASGAVQPGQQITVLPGGKSATVAQVLDHTRQP EEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC KAVLAGHSAGIILDRELDVSRGDWLLAEGGFEPPLGVREITAEVAWMDDEPLVPGRMYWA CEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHEEEECCCCCCCCCEEEEE LQGHRWVKAKIKRIVHQVNINTLETHDATHLDANAIGVVELALLEPIPARPYLQSRILGS ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHCE LVLVDTASHKTSGAALVL EEEEECCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]