Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788170

Identifier: 91788170

GI number: 91788170

Start: 2396279

End: 2396614

Strand: Reverse

Name: 91788170

Synonym: Bpro_2301

Alternate gene names: NA

Gene position: 2396614-2396279 (Counterclockwise)

Preceding gene: 91788171

Following gene: 91788168

Centisome position: 46.09

GC content: 58.33

Gene sequence:

>336_bases
ATGGACCACACGATCACCAGCATGCAGCCTTGTATCGAGGCCTGCACCCACTGCCACCACGTTTGCCTTCAGACAGCCAT
GACGCATTGCCTGCAGATCGGCGGCAAGCATCTGGACCCTGACCATTTCAGCCTGATGATGAACTGTGCGGAAATCTGCC
AGGCATCGGCCAATCTTCAACTCAGCGGCTCCGAGTTCGTACCCAAACTTTGCGTGCTGTGTGCCGAGATCTGCGCGGCC
TGCGCAGTCAGCTGTGAGGCCATCGGCGAAATGGATGAGTGCGTGCGGGCTTGCCGAAAATGTGCAGAGTCCTGCAGCAG
CATGGCTGTGGTCTGA

Upstream 100 bases:

>100_bases
ACGTCAGCCGGCTCCTACAAGAGCAGTTGACGCTGTCTGCCAGCCACGGGGAACCCCAAGGGGAATAATGAAAAATCATG
CACTGAATCGCGGGACGATC

Downstream 100 bases:

>100_bases
GTATCTCGGGGTATCTGGCTGAACCGCCTCTGGTACCAGCAGGTGGTGGCATACGCTTAGGGTCTGAAGCCTTCCCCGCT
GGTCCGGCACCGGCGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MDHTITSMQPCIEACTHCHHVCLQTAMTHCLQIGGKHLDPDHFSLMMNCAEICQASANLQLSGSEFVPKLCVLCAEICAA
CAVSCEAIGEMDECVRACRKCAESCSSMAVV

Sequences:

>Translated_111_residues
MDHTITSMQPCIEACTHCHHVCLQTAMTHCLQIGGKHLDPDHFSLMMNCAEICQASANLQLSGSEFVPKLCVLCAEICAA
CAVSCEAIGEMDECVRACRKCAESCSSMAVV
>Mature_111_residues
MDHTITSMQPCIEACTHCHHVCLQTAMTHCLQIGGKHLDPDHFSLMMNCAEICQASANLQLSGSEFVPKLCVLCAEICAA
CAVSCEAIGEMDECVRACRKCAESCSSMAVV

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11911; Mature: 11911

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

14.4 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
20.7 %Cys+Met (Translated Protein)
14.4 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
20.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHTITSMQPCIEACTHCHHVCLQTAMTHCLQIGGKHLDPDHFSLMMNCAEICQASANLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
LSGSEFVPKLCVLCAEICAACAVSCEAIGEMDECVRACRKCAESCSSMAVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDHTITSMQPCIEACTHCHHVCLQTAMTHCLQIGGKHLDPDHFSLMMNCAEICQASANLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
LSGSEFVPKLCVLCAEICAACAVSCEAIGEMDECVRACRKCAESCSSMAVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA