| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788163
Identifier: 91788163
GI number: 91788163
Start: 2386623
End: 2387603
Strand: Reverse
Name: 91788163
Synonym: Bpro_2294
Alternate gene names: NA
Gene position: 2387603-2386623 (Counterclockwise)
Preceding gene: 91788165
Following gene: 91788162
Centisome position: 45.91
GC content: 66.16
Gene sequence:
>981_bases ATGAAACGCCTACTGTCCGTCCTGCTCGCCACGCTGGCCGCGTGGTCTGCAGCACCCGCCCAGGCGCAAGCGCCCGCAGC GCAGCCCTTTCCTACCCGACCCGTCACGGTGGTGGTGCCCTTTCCGCCCGGCGGCGGCACCGATGTCGGCGCCCGTCTCG TGGCCCAAAAACTCTCGCTCAAATGGGGACAGCCGGTGCTGGTCGACAACAAGGCCGGCGCCTCAGGCATGGTCGGCGCC GATGTCGTCGCCAGGGCCAAGCCGGACGGCTACACACTGCTGGTCGGCAATGTCGGCACGCAGTCGGTCAATCCCTCGCT GTACAAAAAAATGAGCTACGACCCGGACCGGGCGTTTGCCCCCGTCAGCATGATCGCCGAGCTGCCGCTGGTGCTGTTGA TCACGCCGTCCCTGCCCTACCAGTCGATCCGGGACCTGGTGGCTGCCGCCAGATCGGAGCCCGGAAAGCTCAGCTATGCC AGCTCCGGCAGTGGCGGCGCGCCCCACCTGGCGGCTGAAATATTCAGGAAGTCCGGCGGCGTCAACATGCTGCACGTACC TTACAAAGGCGGTGGTCCCGCCGTGACCGACCTGATGGCCGGTCACGTCGACATCCTGTTTGCCACGGTGCTGGAATCCA TCGGCCATATCAAGTCGGGCAAGCTGCGCGGCCTGGCTGTCAGTTCCGCCAGCCGGTCGCCCGCCCTGCCCGACATGCCC ACCGTTGGGGAAAGCCTGCCAGGCTTTGACACCGGCTCCTGGATCGGCATGCTGGCTCCGGCAGGCACGCCACCCGCCAT CGTCGAAAAAATCTCTGCCGATGTCCGCGAAGTGCTGGCCCAGCCCGATACCCGCCAGACCCTGATCATGCAGGGGGCCA CGCCCCTGGGGCTCACACCCGCAGCCTTCCAGGCACGCATCGATGCAGACCGGCAGCGTTACGGTCGCATCATCCGTGAA AGCGGCATCACGATCGAATAG
Upstream 100 bases:
>100_bases CTGGCATACTAGAATACTACAAAGAAATTTCGGTACGATAACCCGAGAAACCATCCATCCGCCCAAAGCGGATAGGACCT ACCCACCGCGAGGAGACACC
Downstream 100 bases:
>100_bases CTTGAACAACCAAAAGATTCTCCAACCCCCACAGCAACCGCATCCCCTTTATAGCCCCAGGAATCCAGATGAAAAAACTT CTTGCCGCCATTGCCGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKRLLSVLLATLAAWSAAPAQAQAPAAQPFPTRPVTVVVPFPPGGGTDVGARLVAQKLSLKWGQPVLVDNKAGASGMVGA DVVARAKPDGYTLLVGNVGTQSVNPSLYKKMSYDPDRAFAPVSMIAELPLVLLITPSLPYQSIRDLVAAARSEPGKLSYA SSGSGGAPHLAAEIFRKSGGVNMLHVPYKGGGPAVTDLMAGHVDILFATVLESIGHIKSGKLRGLAVSSASRSPALPDMP TVGESLPGFDTGSWIGMLAPAGTPPAIVEKISADVREVLAQPDTRQTLIMQGATPLGLTPAAFQARIDADRQRYGRIIRE SGITIE
Sequences:
>Translated_326_residues MKRLLSVLLATLAAWSAAPAQAQAPAAQPFPTRPVTVVVPFPPGGGTDVGARLVAQKLSLKWGQPVLVDNKAGASGMVGA DVVARAKPDGYTLLVGNVGTQSVNPSLYKKMSYDPDRAFAPVSMIAELPLVLLITPSLPYQSIRDLVAAARSEPGKLSYA SSGSGGAPHLAAEIFRKSGGVNMLHVPYKGGGPAVTDLMAGHVDILFATVLESIGHIKSGKLRGLAVSSASRSPALPDMP TVGESLPGFDTGSWIGMLAPAGTPPAIVEKISADVREVLAQPDTRQTLIMQGATPLGLTPAAFQARIDADRQRYGRIIRE SGITIE >Mature_326_residues MKRLLSVLLATLAAWSAAPAQAQAPAAQPFPTRPVTVVVPFPPGGGTDVGARLVAQKLSLKWGQPVLVDNKAGASGMVGA DVVARAKPDGYTLLVGNVGTQSVNPSLYKKMSYDPDRAFAPVSMIAELPLVLLITPSLPYQSIRDLVAAARSEPGKLSYA SSGSGGAPHLAAEIFRKSGGVNMLHVPYKGGGPAVTDLMAGHVDILFATVLESIGHIKSGKLRGLAVSSASRSPALPDMP TVGESLPGFDTGSWIGMLAPAGTPPAIVEKISADVREVLAQPDTRQTLIMQGATPLGLTPAAFQARIDADRQRYGRIIRE SGITIE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33839; Mature: 33839
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLSVLLATLAAWSAAPAQAQAPAAQPFPTRPVTVVVPFPPGGGTDVGARLVAQKLSL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHC KWGQPVLVDNKAGASGMVGADVVARAKPDGYTLLVGNVGTQSVNPSLYKKMSYDPDRAFA CCCCEEEEECCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHH PVSMIAELPLVLLITPSLPYQSIRDLVAAARSEPGKLSYASSGSGGAPHLAAEIFRKSGG HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCC VNMLHVPYKGGGPAVTDLMAGHVDILFATVLESIGHIKSGKLRGLAVSSASRSPALPDMP CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC TVGESLPGFDTGSWIGMLAPAGTPPAIVEKISADVREVLAQPDTRQTLIMQGATPLGLTP CCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCH AAFQARIDADRQRYGRIIRESGITIE HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRLLSVLLATLAAWSAAPAQAQAPAAQPFPTRPVTVVVPFPPGGGTDVGARLVAQKLSL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHC KWGQPVLVDNKAGASGMVGADVVARAKPDGYTLLVGNVGTQSVNPSLYKKMSYDPDRAFA CCCCEEEEECCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHH PVSMIAELPLVLLITPSLPYQSIRDLVAAARSEPGKLSYASSGSGGAPHLAAEIFRKSGG HHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCC VNMLHVPYKGGGPAVTDLMAGHVDILFATVLESIGHIKSGKLRGLAVSSASRSPALPDMP CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC TVGESLPGFDTGSWIGMLAPAGTPPAIVEKISADVREVLAQPDTRQTLIMQGATPLGLTP CCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCH AAFQARIDADRQRYGRIIRESGITIE HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]