| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788162
Identifier: 91788162
GI number: 91788162
Start: 2385592
End: 2386554
Strand: Reverse
Name: 91788162
Synonym: Bpro_2293
Alternate gene names: NA
Gene position: 2386554-2385592 (Counterclockwise)
Preceding gene: 91788163
Following gene: 91788161
Centisome position: 45.89
GC content: 63.34
Gene sequence:
>963_bases ATGAAAAAACTTCTTGCCGCCATTGCCGTCTCTGCCCTGTCAGTCAGCAGCGCGCTGAATGCGCAAACCTTCCCCAGCAA ATCCATCACCATCGTCGTGCCAGCCTCTCCCGGTGGCGCCATTGACCTGGCCGCTCGGCTGATCGGCCAGAAGCTGACGG AGTCCACCGGCCAGCCGGTGGTGATTGACAACAAGGCCGGCGCCACCGGCATCATCGGCACGGATTTCGTGGCCAAGTCC GCTCCCGACGGCCACACCCTGGCACTCGTAGCCAGCAGCCACGCCATCAATCCGAGCATGAAGAAAGTGCTGCCATTTGA CACGCTCAAGAGCTTTGAGCCGGTGGTGATCACGCACGTCGTGCCGCTGATGCTGGTGGTGTCGCCAACGCTGCCGGTCA AGACCCTGAAGGAACTGGTGGCTTATGGCAAAGCCAACCCCGGCAAGCTGTCTTTTGCCTCCAGCGGTCTGGGCGGTGCG CCCCATTTCAGCGGCGAACTGTTCAAGACCATGGCCGGCATCGACATGGTGCACGTGCCTTACAAGGGCAGCACGCTGGC CCATCCGGACCTGATCAGCGGCCGCACGTCCCTGATGTTTGACACGGTGGCAGCCATCAACACCCAGGTCAAGAGCGACA AGGTCCGCGCGCTGGCCGTGACCACGGCCAAGCGGTCCGCTGTTGCCTCTGATGTCCCCACCATGGCCGAGGCGGGCATG TCGGGTTACGAGACCAGCACCTGGGGCGGCATTCTGGCGCCCGCCGGCACGCCCAAGGCCGTCGTTGCCAAGCTGAACGC GGAAATCAACAAGGCACTCAGCGCGCCGGACGTGCGCCAGCGCCTGCAGGAAGCCGGGATTGAAGTGGGCGGCGGCACGC CCCAGCAATTCAGCAGCTTCATCCAGTCTGAAATGGTCAAGTGGGCCAAGGTGGCCAAGGACGCCGACATCCAGCCCGAG TAA
Upstream 100 bases:
>100_bases TCATCCGTGAAAGCGGCATCACGATCGAATAGCTTGAACAACCAAAAGATTCTCCAACCCCCACAGCAACCGCATCCCCT TTATAGCCCCAGGAATCCAG
Downstream 100 bases:
>100_bases GGCCCGGATAGCTATCGAGATAGCCTGAGGACTGATACGTGAACCACGGCATGAATCACAACACCACCCCGGCAAGTACC CAGGTACTGGCCAATGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE
Sequences:
>Translated_320_residues MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE >Mature_320_residues MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33048; Mature: 33048
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPV CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCE VIDNKAGATGIIGTDFVAKSAPDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHV EEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCHHHHHH VPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGAPHFSGELFKTMAGIDMVHVP HHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEEC YKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHCCC SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSF CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHH IQSEMVKWAKVAKDADIQPE HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPV CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCE VIDNKAGATGIIGTDFVAKSAPDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHV EEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCHHHHHH VPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGAPHFSGELFKTMAGIDMVHVP HHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEEC YKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHCCC SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSF CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHH IQSEMVKWAKVAKDADIQPE HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]