Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788162

Identifier: 91788162

GI number: 91788162

Start: 2385592

End: 2386554

Strand: Reverse

Name: 91788162

Synonym: Bpro_2293

Alternate gene names: NA

Gene position: 2386554-2385592 (Counterclockwise)

Preceding gene: 91788163

Following gene: 91788161

Centisome position: 45.89

GC content: 63.34

Gene sequence:

>963_bases
ATGAAAAAACTTCTTGCCGCCATTGCCGTCTCTGCCCTGTCAGTCAGCAGCGCGCTGAATGCGCAAACCTTCCCCAGCAA
ATCCATCACCATCGTCGTGCCAGCCTCTCCCGGTGGCGCCATTGACCTGGCCGCTCGGCTGATCGGCCAGAAGCTGACGG
AGTCCACCGGCCAGCCGGTGGTGATTGACAACAAGGCCGGCGCCACCGGCATCATCGGCACGGATTTCGTGGCCAAGTCC
GCTCCCGACGGCCACACCCTGGCACTCGTAGCCAGCAGCCACGCCATCAATCCGAGCATGAAGAAAGTGCTGCCATTTGA
CACGCTCAAGAGCTTTGAGCCGGTGGTGATCACGCACGTCGTGCCGCTGATGCTGGTGGTGTCGCCAACGCTGCCGGTCA
AGACCCTGAAGGAACTGGTGGCTTATGGCAAAGCCAACCCCGGCAAGCTGTCTTTTGCCTCCAGCGGTCTGGGCGGTGCG
CCCCATTTCAGCGGCGAACTGTTCAAGACCATGGCCGGCATCGACATGGTGCACGTGCCTTACAAGGGCAGCACGCTGGC
CCATCCGGACCTGATCAGCGGCCGCACGTCCCTGATGTTTGACACGGTGGCAGCCATCAACACCCAGGTCAAGAGCGACA
AGGTCCGCGCGCTGGCCGTGACCACGGCCAAGCGGTCCGCTGTTGCCTCTGATGTCCCCACCATGGCCGAGGCGGGCATG
TCGGGTTACGAGACCAGCACCTGGGGCGGCATTCTGGCGCCCGCCGGCACGCCCAAGGCCGTCGTTGCCAAGCTGAACGC
GGAAATCAACAAGGCACTCAGCGCGCCGGACGTGCGCCAGCGCCTGCAGGAAGCCGGGATTGAAGTGGGCGGCGGCACGC
CCCAGCAATTCAGCAGCTTCATCCAGTCTGAAATGGTCAAGTGGGCCAAGGTGGCCAAGGACGCCGACATCCAGCCCGAG
TAA

Upstream 100 bases:

>100_bases
TCATCCGTGAAAGCGGCATCACGATCGAATAGCTTGAACAACCAAAAGATTCTCCAACCCCCACAGCAACCGCATCCCCT
TTATAGCCCCAGGAATCCAG

Downstream 100 bases:

>100_bases
GGCCCGGATAGCTATCGAGATAGCCTGAGGACTGATACGTGAACCACGGCATGAATCACAACACCACCCCGGCAAGTACC
CAGGTACTGGCCAATGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS
APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA
PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM
SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE

Sequences:

>Translated_320_residues
MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS
APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA
PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM
SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE
>Mature_320_residues
MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPVVIDNKAGATGIIGTDFVAKS
APDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHVVPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGA
PHFSGELFKTMAGIDMVHVPYKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM
SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSFIQSEMVKWAKVAKDADIQPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33048; Mature: 33048

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCE
VIDNKAGATGIIGTDFVAKSAPDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHV
EEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCHHHHHH
VPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGAPHFSGELFKTMAGIDMVHVP
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEEC
YKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHCCC
SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSF
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHH
IQSEMVKWAKVAKDADIQPE
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKLLAAIAVSALSVSSALNAQTFPSKSITIVVPASPGGAIDLAARLIGQKLTESTGQPV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCE
VIDNKAGATGIIGTDFVAKSAPDGHTLALVASSHAINPSMKKVLPFDTLKSFEPVVITHV
EEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCHHHHHH
VPLMLVVSPTLPVKTLKELVAYGKANPGKLSFASSGLGGAPHFSGELFKTMAGIDMVHVP
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEEC
YKGSTLAHPDLISGRTSLMFDTVAAINTQVKSDKVRALAVTTAKRSAVASDVPTMAEAGM
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHCCC
SGYETSTWGGILAPAGTPKAVVAKLNAEINKALSAPDVRQRLQEAGIEVGGGTPQQFSSF
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHH
IQSEMVKWAKVAKDADIQPE
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]