| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788131
Identifier: 91788131
GI number: 91788131
Start: 2347202
End: 2349052
Strand: Reverse
Name: 91788131
Synonym: Bpro_2260
Alternate gene names: NA
Gene position: 2349052-2347202 (Counterclockwise)
Preceding gene: 91788132
Following gene: 91788130
Centisome position: 45.17
GC content: 64.94
Gene sequence:
>1851_bases TTGCCGCGAAAATCGCTATCCAGCCCTCCTGCGGGCATCTCTCCTGATCACCAAGCCGTTTTGAACAAGCCTTCGCCCGC CATCATTGCCCAGTCTGCCGTGCGCCGCCTGCCGCGGCTGGCGCTGTTGCTGTTTTGCCTGGCTTATGTGCTGCCCGGAT TTTTTGGCCGCGGCCCCTGGAAATACGAGGACATCGCCGCCTTCGGCGTCATGCGGGAGCTGACGACCTCCGCGGCCAAC TGGCTGCAGCCTCAATTGCTCGGCCAGATCACGGGGTTTGAGGCGCTGGTGCCTTATTGGCTGGGGGCCGTCGCCATCAA GGGCCTGCCCTTCCTGGACCCGGCTTTTGCGGTACGCATTCCGTTTGGCCTGCTGCTGGCGATGACGCTGATCACCACCT GGTACGCCATCTACTATCTGGCCCGCAGCCCGCAGGCTCAGCCCGTGGCCTTTGCCTTTGGCGGCGAAGCCAGCCCGGTG GACTACGCCCGGGCCATTGCAGACGCCGGTTTGCTGGCGCTGATTGCCAGCCTGGGCCTGGCACAGTTGTCACACGAGAC GACGCCCGCGCTGGCGCAACTGGGCTTTACGGCCCTGGTGTTTTATGCGATGTCTGCCAGCCCCTATCGCCGGGCAACCA AAATTGTGGGTCCGGCACTGGGCTTGTTGATTGGTCTCGCAGGACTTGCCCTGAGTGGCGCGCCCACACTGGCCCTGCTG CTGGGTGTGGGCGGCGTACTGGTCGAAGGGGCTCAACTTCACTGGGGCTACAACCAGGATGGCCAGGGCAGTCAGGCCAA CACTGACAGCAGACGGCAGTCCTGGCATTGGGTGCTGCTGATTGCCGGCGCCACGCTACTGGCCGCACTGCTGGCGTATG CGCTGGACCTGTGGCGCTGGCGAATTCAGCTGCCCGGCGCCAGTGATCAACCAGCCTGGAGAGACTGGCGCCGGCTAGGG CGTTTGCTACTGTGGTTTACCTGGCCAACCTGGCCGCTGGCGCTGTGGACGCTGTGGCGCTGGCGCAGGCAACTGGCCAG CCGCCACGTTGCCCTGCCCTTGTGGTTTGCCGGCATGGCTGTCGCCGCCACGCTGACCACCACTGCCTCCGACCGCAGTC TGCTGCTGAGCTTGCCGCCGCTGGCGGCACTGGCCGCGTTTGCCCTGCCAACGCTCAAGCGTAGCTGGGCCTCGCTGATT GACTGGTTCACCCTGCTCTTTTTTACGGGCTGCGCCATCATCATCTGGGTCGTCTGGATTGCCATGCAGACCGGCGTGCC GCGGCAGCCCGCGGCCAATGTTGCCAAGCTGGCGCCGGGCTTCGAACCGAGCTTTTCGTGGCTTGCTTTTTTGGCAGCGG TGGCCGCCACGCTGGCCTGGACCTGGCTCGTCAAGTGGCGGGCCGGCGCACAGCGCGCAGCCATCTGGAAGTCGCTGGTC CTGCCGGCCGGCGGCGCCACCCTCTGCTGGCTGCTGCTGATGACACTCTGGATGCCCCTGCTCGACTATGCGCGCAGCTA TGCGCCGATGTCGCGGCAGATCGCCAGCCTGGTTGACAAAAATGCCTGTGTCGAGATCTATGGCGTGGACAGCGCCCAGG CTGCTGCGCTGCAGTACCACGGCCGGCTGGAACTGCGCCAGGCGACCTCCCATGCAAGCTGTCCTTATCTGGTCGTCGAT GTCGATGCCCAGTCGACCCTCAGCAACACCGTCAATTTGCCGGACTGGGCGTTCCTGGCCACCGTGCGCAGACCGACGGA CAAAAATGAGAACGTCCTGGTTTTCAAACGGGTCAGCACGGATAACCAGGCCCGGGCGGCAAAGCGAGACGGTCTGCCCG CCCGCCCTTGA
Upstream 100 bases:
>100_bases TCCACCAGCTGCCGAGTAAGCTTCGAAACATTCTTTCGCCAGCCTGCAAGAAGCAGCCTGAATTTCAGGCTGCTTTTTTT TCGGCTAAAACTGCCACTGG
Downstream 100 bases:
>100_bases GCGAACTCAAAATCATCAGCCAGCACGCGGGTACGGTGCTGGTGGGTCAGCTGGCCGTGATGGCCTTTGGCGTGGCAGAC ACCGTGATTGCCGGGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Inner Membrane Protein; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MPRKSLSSPPAGISPDHQAVLNKPSPAIIAQSAVRRLPRLALLLFCLAYVLPGFFGRGPWKYEDIAAFGVMRELTTSAAN WLQPQLLGQITGFEALVPYWLGAVAIKGLPFLDPAFAVRIPFGLLLAMTLITTWYAIYYLARSPQAQPVAFAFGGEASPV DYARAIADAGLLALIASLGLAQLSHETTPALAQLGFTALVFYAMSASPYRRATKIVGPALGLLIGLAGLALSGAPTLALL LGVGGVLVEGAQLHWGYNQDGQGSQANTDSRRQSWHWVLLIAGATLLAALLAYALDLWRWRIQLPGASDQPAWRDWRRLG RLLLWFTWPTWPLALWTLWRWRRQLASRHVALPLWFAGMAVAATLTTTASDRSLLLSLPPLAALAAFALPTLKRSWASLI DWFTLLFFTGCAIIIWVVWIAMQTGVPRQPAANVAKLAPGFEPSFSWLAFLAAVAATLAWTWLVKWRAGAQRAAIWKSLV LPAGGATLCWLLLMTLWMPLLDYARSYAPMSRQIASLVDKNACVEIYGVDSAQAAALQYHGRLELRQATSHASCPYLVVD VDAQSTLSNTVNLPDWAFLATVRRPTDKNENVLVFKRVSTDNQARAAKRDGLPARP
Sequences:
>Translated_616_residues MPRKSLSSPPAGISPDHQAVLNKPSPAIIAQSAVRRLPRLALLLFCLAYVLPGFFGRGPWKYEDIAAFGVMRELTTSAAN WLQPQLLGQITGFEALVPYWLGAVAIKGLPFLDPAFAVRIPFGLLLAMTLITTWYAIYYLARSPQAQPVAFAFGGEASPV DYARAIADAGLLALIASLGLAQLSHETTPALAQLGFTALVFYAMSASPYRRATKIVGPALGLLIGLAGLALSGAPTLALL LGVGGVLVEGAQLHWGYNQDGQGSQANTDSRRQSWHWVLLIAGATLLAALLAYALDLWRWRIQLPGASDQPAWRDWRRLG RLLLWFTWPTWPLALWTLWRWRRQLASRHVALPLWFAGMAVAATLTTTASDRSLLLSLPPLAALAAFALPTLKRSWASLI DWFTLLFFTGCAIIIWVVWIAMQTGVPRQPAANVAKLAPGFEPSFSWLAFLAAVAATLAWTWLVKWRAGAQRAAIWKSLV LPAGGATLCWLLLMTLWMPLLDYARSYAPMSRQIASLVDKNACVEIYGVDSAQAAALQYHGRLELRQATSHASCPYLVVD VDAQSTLSNTVNLPDWAFLATVRRPTDKNENVLVFKRVSTDNQARAAKRDGLPARP >Mature_615_residues PRKSLSSPPAGISPDHQAVLNKPSPAIIAQSAVRRLPRLALLLFCLAYVLPGFFGRGPWKYEDIAAFGVMRELTTSAANW LQPQLLGQITGFEALVPYWLGAVAIKGLPFLDPAFAVRIPFGLLLAMTLITTWYAIYYLARSPQAQPVAFAFGGEASPVD YARAIADAGLLALIASLGLAQLSHETTPALAQLGFTALVFYAMSASPYRRATKIVGPALGLLIGLAGLALSGAPTLALLL GVGGVLVEGAQLHWGYNQDGQGSQANTDSRRQSWHWVLLIAGATLLAALLAYALDLWRWRIQLPGASDQPAWRDWRRLGR LLLWFTWPTWPLALWTLWRWRRQLASRHVALPLWFAGMAVAATLTTTASDRSLLLSLPPLAALAAFALPTLKRSWASLID WFTLLFFTGCAIIIWVVWIAMQTGVPRQPAANVAKLAPGFEPSFSWLAFLAAVAATLAWTWLVKWRAGAQRAAIWKSLVL PAGGATLCWLLLMTLWMPLLDYARSYAPMSRQIASLVDKNACVEIYGVDSAQAAALQYHGRLELRQATSHASCPYLVVDV DAQSTLSNTVNLPDWAFLATVRRPTDKNENVLVFKRVSTDNQARAAKRDGLPARP
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67259; Mature: 67128
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKSLSSPPAGISPDHQAVLNKPSPAIIAQSAVRRLPRLALLLFCLAYVLPGFFGRGPW CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KYEDIAAFGVMRELTTSAANWLQPQLLGQITGFEALVPYWLGAVAIKGLPFLDPAFAVRI CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH PFGLLLAMTLITTWYAIYYLARSPQAQPVAFAFGGEASPVDYARAIADAGLLALIASLGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH AQLSHETTPALAQLGFTALVFYAMSASPYRRATKIVGPALGLLIGLAGLALSGAPTLALL HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGVGGVLVEGAQLHWGYNQDGQGSQANTDSRRQSWHWVLLIAGATLLAALLAYALDLWRW HHCCHHHEECCEEECCCCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH RIQLPGASDQPAWRDWRRLGRLLLWFTWPTWPLALWTLWRWRRQLASRHVALPLWFAGMA EEECCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VAATLTTTASDRSLLLSLPPLAALAAFALPTLKRSWASLIDWFTLLFFTGCAIIIWVVWI HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMQTGVPRQPAANVAKLAPGFEPSFSWLAFLAAVAATLAWTWLVKWRAGAQRAAIWKSLV HHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPAGGATLCWLLLMTLWMPLLDYARSYAPMSRQIASLVDKNACVEIYGVDSAQAAALQYH CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHC GRLELRQATSHASCPYLVVDVDAQSTLSNTVNLPDWAFLATVRRPTDKNENVLVFKRVST CCCHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCC DNQARAAKRDGLPARP CCHHHHHHHCCCCCCC >Mature Secondary Structure PRKSLSSPPAGISPDHQAVLNKPSPAIIAQSAVRRLPRLALLLFCLAYVLPGFFGRGPW CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KYEDIAAFGVMRELTTSAANWLQPQLLGQITGFEALVPYWLGAVAIKGLPFLDPAFAVRI CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH PFGLLLAMTLITTWYAIYYLARSPQAQPVAFAFGGEASPVDYARAIADAGLLALIASLGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH AQLSHETTPALAQLGFTALVFYAMSASPYRRATKIVGPALGLLIGLAGLALSGAPTLALL HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGVGGVLVEGAQLHWGYNQDGQGSQANTDSRRQSWHWVLLIAGATLLAALLAYALDLWRW HHCCHHHEECCEEECCCCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH RIQLPGASDQPAWRDWRRLGRLLLWFTWPTWPLALWTLWRWRRQLASRHVALPLWFAGMA EEECCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VAATLTTTASDRSLLLSLPPLAALAAFALPTLKRSWASLIDWFTLLFFTGCAIIIWVVWI HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMQTGVPRQPAANVAKLAPGFEPSFSWLAFLAAVAATLAWTWLVKWRAGAQRAAIWKSLV HHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPAGGATLCWLLLMTLWMPLLDYARSYAPMSRQIASLVDKNACVEIYGVDSAQAAALQYH CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHC GRLELRQATSHASCPYLVVDVDAQSTLSNTVNLPDWAFLATVRRPTDKNENVLVFKRVST CCCHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCC DNQARAAKRDGLPARP CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA