| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is rpmE2 [H]
Identifier: 91788132
GI number: 91788132
Start: 2349134
End: 2349415
Strand: Reverse
Name: rpmE2 [H]
Synonym: Bpro_2261
Alternate gene names: 91788132
Gene position: 2349415-2349134 (Counterclockwise)
Preceding gene: 91788133
Following gene: 91788131
Centisome position: 45.18
GC content: 54.26
Gene sequence:
>282_bases ATGAAAGAAGGCATTCACCCCAACTACCGCGAAGTTTGCTTCCTGGACTTGTCCAACAACTTCAAGTTTGTGACCCGCTC CTGCGTGAACACCAAAGAAATGGTGAAAATGGAAGACGGCCGCGAGCTGCCCCTGTACAAGCTCGATACGTCCAGCGAAT CGCACCCCTTCTACACCGGTACGCAAAAGTCCGTGGACAACATGGGTGGTCGCGTTGAGAAATTCCGCAACCGCTTCGGC AAAACCGCTGCGAAAGAGGCCACTCCACCAGCTGCCGAGTAA
Upstream 100 bases:
>100_bases AAAAACCGCTGTAAATACCTGATTTATGCCATAATCATAGGCTTAGCGGAAAGTGCCCAAGACTGGCTTGAGTGGCTCCC GCAACGAATAAGGAAAGATC
Downstream 100 bases:
>100_bases GCTTCGAAACATTCTTTCGCCAGCCTGCAAGAAGCAGCCTGAATTTCAGGCTGCTTTTTTTTCGGCTAAAACTGCCACTG GTTGCCGCGAAAATCGCTAT
Product: 50S ribosomal protein L31P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKEGIHPNYREVCFLDLSNNFKFVTRSCVNTKEMVKMEDGRELPLYKLDTSSESHPFYTGTQKSVDNMGGRVEKFRNRFG KTAAKEATPPAAE
Sequences:
>Translated_93_residues MKEGIHPNYREVCFLDLSNNFKFVTRSCVNTKEMVKMEDGRELPLYKLDTSSESHPFYTGTQKSVDNMGGRVEKFRNRFG KTAAKEATPPAAE >Mature_93_residues MKEGIHPNYREVCFLDLSNNFKFVTRSCVNTKEMVKMEDGRELPLYKLDTSSESHPFYTGTQKSVDNMGGRVEKFRNRFG KTAAKEATPPAAE
Specific function: Unknown
COG id: COG0254
COG function: function code J; Ribosomal protein L31
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]
Homologues:
Organism=Escherichia coli, GI2367109, Length=81, Percent_Identity=41.9753086419753, Blast_Score=62, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002150 [H]
Pfam domain/function: PF01197 Ribosomal_L31 [H]
EC number: NA
Molecular weight: Translated: 10609; Mature: 10609
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS01143 RIBOSOMAL_L31
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEGIHPNYREVCFLDLSNNFKFVTRSCVNTKEMVKMEDGRELPLYKLDTSSESHPFYTG CCCCCCCCCCEEEEEECCCCCEEEHHHHCCHHHHEECCCCCCCCEEEECCCCCCCCEECC TQKSVDNMGGRVEKFRNRFGKTAAKEATPPAAE CHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKEGIHPNYREVCFLDLSNNFKFVTRSCVNTKEMVKMEDGRELPLYKLDTSSESHPFYTG CCCCCCCCCCEEEEEECCCCCEEEHHHHCCHHHHEECCCCCCCCEEEECCCCCCCCEECC TQKSVDNMGGRVEKFRNRFGKTAAKEATPPAAE CHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA