| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788086
Identifier: 91788086
GI number: 91788086
Start: 2309154
End: 2309990
Strand: Direct
Name: 91788086
Synonym: Bpro_2213
Alternate gene names: NA
Gene position: 2309154-2309990 (Clockwise)
Preceding gene: 91788085
Following gene: 91788087
Centisome position: 44.4
GC content: 67.03
Gene sequence:
>837_bases ATGAGCATTGACGCGCACTTTCATTGTTGGCAGCTGGCGCGCGGCGACTATGGCTGGTTGAACCCCGCGCGAGATCCGGC GCTGGCACCCATCTGCCGTGATGTGGCCGTGACGGACTGGCAGGCCCAAGCTATGCCGCACGGCGTCACCGGCGGCGTGC TGGTGCAGGCCGCGCCGACGGAAGCTGAAACGCATTTCCTGCTGGCGCAGGCCGATGCGCATCCAGCGGTGCTGGGGGTG GTCGGCTGGGTGGATTTTCTGGCTGCTGATGCGCCTGCCCGCATGGCAGCGTTGGCAGGTCATCCGCGCCTGAAGGGCTT GCGCCCGATGTTGCAGGACATTGGCGACCCCGCGTGGATACTGCAACCGGCGCTGGCGCCCGCATTGCGCGCCATGTCCG ATGGCGGCCTGGTGTTCGATGCCCTGGTCAAGCCAGTTCACCTGCCGCACATCCTGACGCTGGCGCTGCGCTACCCGGAT TTGCGCCTGGTGATAGACCATGGAGCCAAGCCGGCGATTGCCGCCAACGAATGGCAGCCCTGGGCCGATGGGATGGCCCG GCTGGCTTCGCAAACGCAGGCCATGTGCAAACTCTCCGGGTTGATGACCGAGGCCGGCCCGGCACCGGCGCCCGGAGCGG TACGACGATGGGCTGAGCATGTGCTGGCGTGCTTTGGCCCCTCCCGCGTGGTGTGGGGCAGTGACTGGCCGGTACTGGAA CTCGCCGGCAGCTATGGCCAGTGGTGGCGCGAAACGCAGCACCTGCTGACCGGGCTGGGCGTGCAGGAGCAGGCGGCCAT CATGGGTGACAACGCAAAACGCCTCTATCGCCTCTGA
Upstream 100 bases:
>100_bases AATGGGAGGATGCGCTGGCCATGCTGCAGCACCGGATCCAGCCCGGCTTCTGGACGGCGCTGCGTGAGCAGGGCCTGTTG CCCGCCGAGGCACCTACGCC
Downstream 100 bases:
>100_bases CTCGTTTCCGACTCGCCGGTGGCTGGCACAGCATCTGGAGGGGGTCTTTAAAATCACCTCATCATTTGTTGACCGGAAGA ACCCCGCGTGACTGAATTTG
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGV VGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPD LRLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL
Sequences:
>Translated_278_residues MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGV VGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPD LRLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL >Mature_277_residues SIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGVV GWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDL RLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLEL AGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 30011; Mature: 29880
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPT CCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCC EAETHFLLAQADAHPAVLGVVGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWI CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHH LQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDLRLVIDHGAKPAIAANEWQP HHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC WADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHH LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL HCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC >Mature Secondary Structure SIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPT CCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCC EAETHFLLAQADAHPAVLGVVGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWI CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHH LQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDLRLVIDHGAKPAIAANEWQP HHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC WADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHH LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL HCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]