The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788086

Identifier: 91788086

GI number: 91788086

Start: 2309154

End: 2309990

Strand: Direct

Name: 91788086

Synonym: Bpro_2213

Alternate gene names: NA

Gene position: 2309154-2309990 (Clockwise)

Preceding gene: 91788085

Following gene: 91788087

Centisome position: 44.4

GC content: 67.03

Gene sequence:

>837_bases
ATGAGCATTGACGCGCACTTTCATTGTTGGCAGCTGGCGCGCGGCGACTATGGCTGGTTGAACCCCGCGCGAGATCCGGC
GCTGGCACCCATCTGCCGTGATGTGGCCGTGACGGACTGGCAGGCCCAAGCTATGCCGCACGGCGTCACCGGCGGCGTGC
TGGTGCAGGCCGCGCCGACGGAAGCTGAAACGCATTTCCTGCTGGCGCAGGCCGATGCGCATCCAGCGGTGCTGGGGGTG
GTCGGCTGGGTGGATTTTCTGGCTGCTGATGCGCCTGCCCGCATGGCAGCGTTGGCAGGTCATCCGCGCCTGAAGGGCTT
GCGCCCGATGTTGCAGGACATTGGCGACCCCGCGTGGATACTGCAACCGGCGCTGGCGCCCGCATTGCGCGCCATGTCCG
ATGGCGGCCTGGTGTTCGATGCCCTGGTCAAGCCAGTTCACCTGCCGCACATCCTGACGCTGGCGCTGCGCTACCCGGAT
TTGCGCCTGGTGATAGACCATGGAGCCAAGCCGGCGATTGCCGCCAACGAATGGCAGCCCTGGGCCGATGGGATGGCCCG
GCTGGCTTCGCAAACGCAGGCCATGTGCAAACTCTCCGGGTTGATGACCGAGGCCGGCCCGGCACCGGCGCCCGGAGCGG
TACGACGATGGGCTGAGCATGTGCTGGCGTGCTTTGGCCCCTCCCGCGTGGTGTGGGGCAGTGACTGGCCGGTACTGGAA
CTCGCCGGCAGCTATGGCCAGTGGTGGCGCGAAACGCAGCACCTGCTGACCGGGCTGGGCGTGCAGGAGCAGGCGGCCAT
CATGGGTGACAACGCAAAACGCCTCTATCGCCTCTGA

Upstream 100 bases:

>100_bases
AATGGGAGGATGCGCTGGCCATGCTGCAGCACCGGATCCAGCCCGGCTTCTGGACGGCGCTGCGTGAGCAGGGCCTGTTG
CCCGCCGAGGCACCTACGCC

Downstream 100 bases:

>100_bases
CTCGTTTCCGACTCGCCGGTGGCTGGCACAGCATCTGGAGGGGGTCTTTAAAATCACCTCATCATTTGTTGACCGGAAGA
ACCCCGCGTGACTGAATTTG

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGV
VGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPD
LRLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE
LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL

Sequences:

>Translated_278_residues
MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGV
VGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPD
LRLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE
LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL
>Mature_277_residues
SIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPTEAETHFLLAQADAHPAVLGVV
GWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWILQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDL
RLVIDHGAKPAIAANEWQPWADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLEL
AGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 30011; Mature: 29880

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPT
CCCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCC
EAETHFLLAQADAHPAVLGVVGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWI
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHH
LQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDLRLVIDHGAKPAIAANEWQP
HHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
WADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL
HCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
SIDAHFHCWQLARGDYGWLNPARDPALAPICRDVAVTDWQAQAMPHGVTGGVLVQAAPT
CCCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCC
EAETHFLLAQADAHPAVLGVVGWVDFLAADAPARMAALAGHPRLKGLRPMLQDIGDPAWI
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHH
LQPALAPALRAMSDGGLVFDALVKPVHLPHILTLALRYPDLRLVIDHGAKPAIAANEWQP
HHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
WADGMARLASQTQAMCKLSGLMTEAGPAPAPGAVRRWAEHVLACFGPSRVVWGSDWPVLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LAGSYGQWWRETQHLLTGLGVQEQAAIMGDNAKRLYRL
HCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]