| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pld1 [H]
Identifier: 91788085
GI number: 91788085
Start: 2308153
End: 2309157
Strand: Direct
Name: pld1 [H]
Synonym: Bpro_2212
Alternate gene names: 91788085
Gene position: 2308153-2309157 (Clockwise)
Preceding gene: 91788077
Following gene: 91788086
Centisome position: 44.39
GC content: 67.46
Gene sequence:
>1005_bases ATGCCACCAGTTTTTCCTCCCTGCGCTGCCAGCCAGCTACGCCTTGGTCTCGGCGGTGCGCCCTTGGGCAACCTGTTTAG TGCCGTCACGGATGACGACGCCCAGGCGCTGGTTGACGCCGCCTGGGCCAGCGGTTGCCGCAGTTTTGATACCGCACCTC ATTACGGACATGGCCTGTCGGAACGCCGGCTGGGCGATAGGCTGCGCCGCCATCCGCGTGATGATTTTGTGCTGTCGAGC AAGGTGGGGCGCGTCTTGGTGCCGGATGCCGGCGCGCCCCGCGCCCAGCATGGCTATGTCGATATTCTTCCTTTTCGCCA GGTTTGGGACTTCAGCGCGGCGGGCACGCGCCGCAGCGTGGAGGACAGCCTGCAGCGCCTGGGTCTTTCGAGGCTGGACG TGGCGTATGTGCACGACCCGGATGCGGCGACCCACGGCGCGCGCGCGCCCGAAGTGCTCAGGCAGGTGATTGATGAAACC CTGCCGGCGTTGCGCCAGCTCAAACAGGAGGGCCTGGTACGCGCCATCGGCCTGGGCACCAACGACGTGGATGTGGTGCT GCAGGTGCTGCGTGAGGCCGATCTGGATGTGTTGATGCTGGCCGGACGCTACAGCCTGCTGGACCACAGCGCGCTGCCCG AACTGTTGCCGCAATGCGTGGCGCGCGGCGTGCGCATTGCGCTGGGCGGCGTCTTCAACTCCGGCATTCTTGCCACAGGC ACCCGGCACGGTGCGGCGACGTTCAACTACGCGCCGGCCGCAGGGACCTGGGTGGAGCGCACGGCAAGGATCGAAGCGGT GTGCGAGGCATACGGCGTGCCGCTGCGCGCGGCGGCGCTGCAATTTCCGCTGGCGCATCCGGCGGTGGAAATCGTGATGC TGGGCGCCCGTCAGGTCGCTGAATGGGAGGATGCGCTGGCCATGCTGCAGCACCGGATCCAGCCCGGCTTCTGGACGGCG CTGCGTGAGCAGGGCCTGTTGCCCGCCGAGGCACCTACGCCATGA
Upstream 100 bases:
>100_bases GCTGGAAGTTAATTAATTGCCAAACCACGGGATTTCCCCGTGTTGATGACTGACATGTTAGCTATACCATAGCTGAACTT TTATCGGGATTTACCCTGCC
Downstream 100 bases:
>100_bases GCATTGACGCGCACTTTCATTGTTGGCAGCTGGCGCGCGGCGACTATGGCTGGTTGAACCCCGCGCGAGATCCGGCGCTG GCACCCATCTGCCGTGATGT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPPVFPPCAASQLRLGLGGAPLGNLFSAVTDDDAQALVDAAWASGCRSFDTAPHYGHGLSERRLGDRLRRHPRDDFVLSS KVGRVLVPDAGAPRAQHGYVDILPFRQVWDFSAAGTRRSVEDSLQRLGLSRLDVAYVHDPDAATHGARAPEVLRQVIDET LPALRQLKQEGLVRAIGLGTNDVDVVLQVLREADLDVLMLAGRYSLLDHSALPELLPQCVARGVRIALGGVFNSGILATG TRHGAATFNYAPAAGTWVERTARIEAVCEAYGVPLRAAALQFPLAHPAVEIVMLGARQVAEWEDALAMLQHRIQPGFWTA LREQGLLPAEAPTP
Sequences:
>Translated_334_residues MPPVFPPCAASQLRLGLGGAPLGNLFSAVTDDDAQALVDAAWASGCRSFDTAPHYGHGLSERRLGDRLRRHPRDDFVLSS KVGRVLVPDAGAPRAQHGYVDILPFRQVWDFSAAGTRRSVEDSLQRLGLSRLDVAYVHDPDAATHGARAPEVLRQVIDET LPALRQLKQEGLVRAIGLGTNDVDVVLQVLREADLDVLMLAGRYSLLDHSALPELLPQCVARGVRIALGGVFNSGILATG TRHGAATFNYAPAAGTWVERTARIEAVCEAYGVPLRAAALQFPLAHPAVEIVMLGARQVAEWEDALAMLQHRIQPGFWTA LREQGLLPAEAPTP >Mature_333_residues PPVFPPCAASQLRLGLGGAPLGNLFSAVTDDDAQALVDAAWASGCRSFDTAPHYGHGLSERRLGDRLRRHPRDDFVLSSK VGRVLVPDAGAPRAQHGYVDILPFRQVWDFSAAGTRRSVEDSLQRLGLSRLDVAYVHDPDAATHGARAPEVLRQVIDETL PALRQLKQEGLVRAIGLGTNDVDVVLQVLREADLDVLMLAGRYSLLDHSALPELLPQCVARGVRIALGGVFNSGILATGT RHGAATFNYAPAAGTWVERTARIEAVCEAYGVPLRAAALQFPLAHPAVEIVMLGARQVAEWEDALAMLQHRIQPGFWTAL REQGLLPAEAPTP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=327, Percent_Identity=27.5229357798165, Blast_Score=99, Evalue=4e-22, Organism=Caenorhabditis elegans, GI212645785, Length=299, Percent_Identity=26.7558528428094, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323684, Length=281, Percent_Identity=24.5551601423488, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24646159, Length=286, Percent_Identity=30.0699300699301, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24646155, Length=263, Percent_Identity=31.5589353612167, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646157, Length=284, Percent_Identity=25, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.107 [H]
Molecular weight: Translated: 35977; Mature: 35846
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVFPPCAASQLRLGLGGAPLGNLFSAVTDDDAQALVDAAWASGCRSFDTAPHYGHGLS CCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH ERRLGDRLRRHPRDDFVLSSKVGRVLVPDAGAPRAQHGYVDILPFRQVWDFSAAGTRRSV HHHHHHHHHHCCCCCEEEHHCCCEEEECCCCCCCCCCCCEEEECHHHHHCCCCCCCCHHH EDSLQRLGLSRLDVAYVHDPDAATHGARAPEVLRQVIDETLPALRQLKQEGLVRAIGLGT HHHHHHCCCHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC NDVDVVLQVLREADLDVLMLAGRYSLLDHSALPELLPQCVARGVRIALGGVFNSGILATG CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEECC TRHGAATFNYAPAAGTWVERTARIEAVCEAYGVPLRAAALQFPLAHPAVEIVMLGARQVA CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHH EWEDALAMLQHRIQPGFWTALREQGLLPAEAPTP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PPVFPPCAASQLRLGLGGAPLGNLFSAVTDDDAQALVDAAWASGCRSFDTAPHYGHGLS CCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH ERRLGDRLRRHPRDDFVLSSKVGRVLVPDAGAPRAQHGYVDILPFRQVWDFSAAGTRRSV HHHHHHHHHHCCCCCEEEHHCCCEEEECCCCCCCCCCCCEEEECHHHHHCCCCCCCCHHH EDSLQRLGLSRLDVAYVHDPDAATHGARAPEVLRQVIDETLPALRQLKQEGLVRAIGLGT HHHHHHCCCHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC NDVDVVLQVLREADLDVLMLAGRYSLLDHSALPELLPQCVARGVRIALGGVFNSGILATG CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEECC TRHGAATFNYAPAAGTWVERTARIEAVCEAYGVPLRAAALQFPLAHPAVEIVMLGARQVA CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHH EWEDALAMLQHRIQPGFWTALREQGLLPAEAPTP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA