| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ylaK [H]
Identifier: 91788059
GI number: 91788059
Start: 2281171
End: 2282859
Strand: Reverse
Name: ylaK [H]
Synonym: Bpro_2186
Alternate gene names: 91788059
Gene position: 2282859-2281171 (Counterclockwise)
Preceding gene: 91788060
Following gene: 91788058
Centisome position: 43.9
GC content: 60.45
Gene sequence:
>1689_bases ATGCCCCTGCCCCCCGCCCCGACCAAACGTGCCGCCCTGCTCTCCACCGACGTCCTGGATGCTCCCGCCCGTTCACCCTC CAAGGCTGCACGAAAGACGGACAACGCCGACTCAGGCCGCAAACCCCCGGTGCTGGATCTGTTTGACAACCGTACAGTCA CGGCCGGCGGTGGCGATCATCCCGTCGCTTACAAAGGCAAAGAGCCTCCCCGCCCCGGAAGAACTGGCGAAGACAGCTAT GAAAAAGAGAGCATTCCACTGCCCCAGCCAGCACTCAAACCCAAAAAGACCAAACATGTCGGTCCCGCCAAGCTGTTTGT GCTCGACACCAATGTGCTGATGCACGACCCGATGTGCCTGTTCCGCTTTGAAGAACACGACATCTTTCTGCCGATGATCG TGCTCGAGGAGCTGGACGGGCACAAAAAAGGCATGACCGAGGTGGCCCGCAATGCGCGCCAGACCAGCCGCACGCTGGAT GCACTGGCCGGCGCCCAAGGCGCCGACATTGGCAAGGGCCTCAAACTGGACACCACCGGCCACCCGGAGGCAGGCGGCAG CCTGTTTTTCCAGACCAAACCGATGGACTACACGTTGCCGATGAGCCTGCCGCAGGGCAAGGCCGACAACCAGATCCTGG GCGTGGTCGAGGCCCTGCGCAAGGAATATGCGCCGCGTGAAGTGGTGCTGGTGTCCAAGGACATCAACATGCGCGTCAAG GCGCGTGCGCTGGGCCTGGCCACGGATGACTACCAGAACGACAAGACGCTGGAAGACGGCGACCTGCTCTATGCCGGTTC GCTCGCGCTGCCGGCTGACTTCTGGACACGGCAGAGCAAGACGATTGAAAGCTGGCAGCAGGGCAGCCACACTTTTTACC GGATCACCGGCCCTATCGTGGCCAGCCTGCTGATCAACCAGTTTGTCTTTTTTGAGGCCCCTGGAGAGCCCCCGCTGTAT GCCAGAGTCACGGAAATCCGGGCCAAAACAGCTGTGCTGAAAACCCTCAAGGATTACAACCATTTGAAAAATGCGGTCTG GGGCGTGACCACGCGTAACCGCGAGCAAAACTTTGCGATGAACCTGCTGATGGACCCTGAAGTGGATTTCGTGACGCTGG CTGGTACGGCGGGTACCGGAAAAACACTGATGGCGCTGGCCAGCGGTCTCACGCAGGTGCTTGACGACCGCCGCTACACC GAGATCATCATGACGCGAGCAACCGTTTCGGTCGGTGAAGACATTGGCTTTTTGCCGGGCACCGAAGAGGAAAAAATGGG TCCATGGATGGGCGCGCTTGACGACAACCTGGAAGTACTGGGTAAAACCGACAGTGGTTCCGGCGAGTGGGGACGCGCAG CCACCAACGAGCTGATCCGTTCGCGCATCAAGGTCAAGAGCATGAACTTCATGCGCGGCCGCACCTTCCTCAACAAGTAC GTCATCATCGACGAGGCACAAAACCTGACACCCAAGCAGATGAAGACCCTCATCACCCGAGCCGGCCCCGGTACCAAGAT CATCTGCATGGGCAACCTGGCGCAGATCGACACCCCCTACCTCACCGAAGGCTCCTCGGGAATGACATTCGCGGTCGATC GCTTCAAGGGCTGGCCGCATGGCGGGCACATCACGCTGGCGCGAGGGGAACGCTCACGGCTGGCCGACTTTGCCAGTGAG GTGCTGTAG
Upstream 100 bases:
>100_bases TGCTGTTGACCTTCGCAACTGCGTCAAAACAAAAAGCCGCCCCGGCCTTGAGGCGGCTTTTTTGCTTCTGGAACCACCTT TCAAGAGAGTTTTAAGCACC
Downstream 100 bases:
>100_bases CCGCCGGGGCAACGCGACAGCGAATCGGGAAACGTAAAAAGTAAAAAGGCCAGGTTGCATGACCTGGCCTTTTTTACGTC CGAAATTCAGTCCTGAAAAT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MPLPPAPTKRAALLSTDVLDAPARSPSKAARKTDNADSGRKPPVLDLFDNRTVTAGGGDHPVAYKGKEPPRPGRTGEDSY EKESIPLPQPALKPKKTKHVGPAKLFVLDTNVLMHDPMCLFRFEEHDIFLPMIVLEELDGHKKGMTEVARNARQTSRTLD ALAGAQGADIGKGLKLDTTGHPEAGGSLFFQTKPMDYTLPMSLPQGKADNQILGVVEALRKEYAPREVVLVSKDINMRVK ARALGLATDDYQNDKTLEDGDLLYAGSLALPADFWTRQSKTIESWQQGSHTFYRITGPIVASLLINQFVFFEAPGEPPLY ARVTEIRAKTAVLKTLKDYNHLKNAVWGVTTRNREQNFAMNLLMDPEVDFVTLAGTAGTGKTLMALASGLTQVLDDRRYT EIIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEVLGKTDSGSGEWGRAATNELIRSRIKVKSMNFMRGRTFLNKY VIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGMTFAVDRFKGWPHGGHITLARGERSRLADFASE VL
Sequences:
>Translated_562_residues MPLPPAPTKRAALLSTDVLDAPARSPSKAARKTDNADSGRKPPVLDLFDNRTVTAGGGDHPVAYKGKEPPRPGRTGEDSY EKESIPLPQPALKPKKTKHVGPAKLFVLDTNVLMHDPMCLFRFEEHDIFLPMIVLEELDGHKKGMTEVARNARQTSRTLD ALAGAQGADIGKGLKLDTTGHPEAGGSLFFQTKPMDYTLPMSLPQGKADNQILGVVEALRKEYAPREVVLVSKDINMRVK ARALGLATDDYQNDKTLEDGDLLYAGSLALPADFWTRQSKTIESWQQGSHTFYRITGPIVASLLINQFVFFEAPGEPPLY ARVTEIRAKTAVLKTLKDYNHLKNAVWGVTTRNREQNFAMNLLMDPEVDFVTLAGTAGTGKTLMALASGLTQVLDDRRYT EIIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEVLGKTDSGSGEWGRAATNELIRSRIKVKSMNFMRGRTFLNKY VIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGMTFAVDRFKGWPHGGHITLARGERSRLADFASE VL >Mature_561_residues PLPPAPTKRAALLSTDVLDAPARSPSKAARKTDNADSGRKPPVLDLFDNRTVTAGGGDHPVAYKGKEPPRPGRTGEDSYE KESIPLPQPALKPKKTKHVGPAKLFVLDTNVLMHDPMCLFRFEEHDIFLPMIVLEELDGHKKGMTEVARNARQTSRTLDA LAGAQGADIGKGLKLDTTGHPEAGGSLFFQTKPMDYTLPMSLPQGKADNQILGVVEALRKEYAPREVVLVSKDINMRVKA RALGLATDDYQNDKTLEDGDLLYAGSLALPADFWTRQSKTIESWQQGSHTFYRITGPIVASLLINQFVFFEAPGEPPLYA RVTEIRAKTAVLKTLKDYNHLKNAVWGVTTRNREQNFAMNLLMDPEVDFVTLAGTAGTGKTLMALASGLTQVLDDRRYTE IIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEVLGKTDSGSGEWGRAATNELIRSRIKVKSMNFMRGRTFLNKYV IIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGMTFAVDRFKGWPHGGHITLARGERSRLADFASEV L
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=32.4607329842932, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI145693103, Length=218, Percent_Identity=33.0275229357798, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 61681; Mature: 61550
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPPAPTKRAALLSTDVLDAPARSPSKAARKTDNADSGRKPPVLDLFDNRTVTAGGGDH CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCEEECCCCCC PVAYKGKEPPRPGRTGEDSYEKESIPLPQPALKPKKTKHVGPAKLFVLDTNVLMHDPMCL CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCEEE FRFEEHDIFLPMIVLEELDGHKKGMTEVARNARQTSRTLDALAGAQGADIGKGLKLDTTG EEECCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC HPEAGGSLFFQTKPMDYTLPMSLPQGKADNQILGVVEALRKEYAPREVVLVSKDINMRVK CCCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEE ARALGLATDDYQNDKTLEDGDLLYAGSLALPADFWTRQSKTIESWQQGSHTFYRITGPIV EEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHCCCCEEEEEHHHHH ASLLINQFVFFEAPGEPPLYARVTEIRAKTAVLKTLKDYNHLKNAVWGVTTRNREQNFAM HHHHHHHHEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEE NLLMDPEVDFVTLAGTAGTGKTLMALASGLTQVLDDRRYTEIIMTRATVSVGEDIGFLPG EEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEHHHHCCCCCCCCCCC TEEEKMGPWMGALDDNLEVLGKTDSGSGEWGRAATNELIRSRIKVKSMNFMRGRTFLNKY CCHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGMTFAVDRFKGWPH EEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEECCCCCCEEEEECCCCCCC GGHITLARGERSRLADFASEVL CCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure PLPPAPTKRAALLSTDVLDAPARSPSKAARKTDNADSGRKPPVLDLFDNRTVTAGGGDH CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCEEECCCCCC PVAYKGKEPPRPGRTGEDSYEKESIPLPQPALKPKKTKHVGPAKLFVLDTNVLMHDPMCL CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCEEE FRFEEHDIFLPMIVLEELDGHKKGMTEVARNARQTSRTLDALAGAQGADIGKGLKLDTTG EEECCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC HPEAGGSLFFQTKPMDYTLPMSLPQGKADNQILGVVEALRKEYAPREVVLVSKDINMRVK CCCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEE ARALGLATDDYQNDKTLEDGDLLYAGSLALPADFWTRQSKTIESWQQGSHTFYRITGPIV EEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHCCCCEEEEEHHHHH ASLLINQFVFFEAPGEPPLYARVTEIRAKTAVLKTLKDYNHLKNAVWGVTTRNREQNFAM HHHHHHHHEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEE NLLMDPEVDFVTLAGTAGTGKTLMALASGLTQVLDDRRYTEIIMTRATVSVGEDIGFLPG EEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEHHHHCCCCCCCCCCC TEEEKMGPWMGALDDNLEVLGKTDSGSGEWGRAATNELIRSRIKVKSMNFMRGRTFLNKY CCHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGMTFAVDRFKGWPH EEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEECCCCCCEEEEECCCCCCC GGHITLARGERSRLADFASEVL CCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]