Click here to switch to the map view.

The map label for this gene is ygaF [H]

Identifier: 91788060

GI number: 91788060

Start: 2283039

End: 2283515

Strand: Reverse

Name: ygaF [H]

Synonym: Bpro_2187

Alternate gene names: 91788060

Gene position: 2283515-2283039 (Counterclockwise)

Preceding gene: 91788061

Following gene: 91788059

Centisome position: 43.91

GC content: 54.72

Gene sequence:

>477_bases
ATGGCAGTCGTCGTCAATAAACCACTCCCCGAATTTGAAGCGAACGCCACGGGTGGCATCAAGGTGTCCAACCAGTCCCA
TCTGGGAAAAGTCGTCGTGCTGTACTTCTACCCCAAGGACAACACCCCCGGCTGCACCACCGAAGCCATGCAGTTCCGTG
ACCACTACAAGGACTTCGTCAAAGCCGGCGCCACCGTCTTTGGCGTCTCGCGCGACAACATGAAATCGCATGACGAATTC
AAGTCCAAGCTGGAACTCCCCTTCGAGCTGATTGCAGATACCGAAGAAAAAATGTGCCACATGTTCGGCGTGGTCAAGAA
CAAGATCATGTACGGCAAAAAGGTCAAGGGCATTGAGCGCAGCACTTTCCTGATTGGCGCCGATGGACAGCTGAAGGAAG
AATGGCGCGGCCTCAAGGTGCCTGGCCATGTCGACGATGTCCTCAAGGCCGTCAAAGCCCTTAAAAAGGCTGCCTGA

Upstream 100 bases:

>100_bases
TTTGGTCGCAGACCGTCGGGATCAACACCGCGGCTGTGAGCATGAAGCATTGCCTATAGCCACGGCTAATTACAACTACT
TTCGTCAGGGTCTACTCAGT

Downstream 100 bases:

>100_bases
AAGCCTGTTGACGCCAGTTCGCAACAGTGCCCGGCAACACTGGATTGCCCTGCCACATCAGTTGTGCATAATGAACTCAT
GCTGTTGACCTTCGCAACTG

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAVVVNKPLPEFEANATGGIKVSNQSHLGKVVVLYFYPKDNTPGCTTEAMQFRDHYKDFVKAGATVFGVSRDNMKSHDEF
KSKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGADGQLKEEWRGLKVPGHVDDVLKAVKALKKAA

Sequences:

>Translated_158_residues
MAVVVNKPLPEFEANATGGIKVSNQSHLGKVVVLYFYPKDNTPGCTTEAMQFRDHYKDFVKAGATVFGVSRDNMKSHDEF
KSKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGADGQLKEEWRGLKVPGHVDDVLKAVKALKKAA
>Mature_157_residues
AVVVNKPLPEFEANATGGIKVSNQSHLGKVVVLYFYPKDNTPGCTTEAMQFRDHYKDFVKAGATVFGVSRDNMKSHDEFK
SKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGADGQLKEEWRGLKVPGHVDDVLKAVKALKKAA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=165, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=4e-12,
Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=37.7622377622378, Blast_Score=99, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322180, Length=132, Percent_Identity=34.0909090909091, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24656348, Length=163, Percent_Identity=30.6748466257669, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17864676, Length=163, Percent_Identity=30.6748466257669, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17738015, Length=166, Percent_Identity=31.3253012048193, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17606; Mature: 17474

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVVNKPLPEFEANATGGIKVSNQSHLGKVVVLYFYPKDNTPGCTTEAMQFRDHYKDFV
CEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
KAGATVFGVSRDNMKSHDEFKSKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIER
HCCCEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
STFLIGADGQLKEEWRGLKVPGHVDDVLKAVKALKKAA
CEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVVVNKPLPEFEANATGGIKVSNQSHLGKVVVLYFYPKDNTPGCTTEAMQFRDHYKDFV
EEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
KAGATVFGVSRDNMKSHDEFKSKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIER
HCCCEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
STFLIGADGQLKEEWRGLKVPGHVDDVLKAVKALKKAA
CEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]