| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yhcV [H]
Identifier: 91788058
GI number: 91788058
Start: 2280332
End: 2280844
Strand: Reverse
Name: yhcV [H]
Synonym: Bpro_2185
Alternate gene names: 91788058
Gene position: 2280844-2280332 (Counterclockwise)
Preceding gene: 91788059
Following gene: 91788048
Centisome position: 43.86
GC content: 61.6
Gene sequence:
>513_bases ATGACAACAGTTTCCGACCTTATGACTCGCGGCGTGCGGACCTTGACGCCCGCCGATACCGTGACATCCGCCGCGCGGGC CATGGATGAACTCAACGTGGGCGTCATTCCGGTCTGCGACGGCGAGAAGCTGGTGGGCATGGTGACCGACCGCGATATTG TCGTGCGCGGCGTGGCGCAGGAACTCGATGCAAAGACCACAGACCTGTCGGACTTGATGAGCACGAACGTGCGCACGGCG CGCGAGAACGAGGACGTGGACGAAGTTCTCAGCGAGATGGCTGAGAGCCAGATTCGCCGGTTACCGGTGGTTGATGATCA GGATCGGCTGGTCGGAATTATTTCCCTGGGCGATATTGCGGCCAAGGACCCCGATAAAGATGCCGATGTGGCCGCCTCCC TGGGAAATATCTCGCTGCCAGCCGAGCCGGACCGTTCGAACCAGTCCCGAACCAGCGGTGAAGCGGACGGCAGCTCGGCA ACCGGAAAGCCGCCACGCAAACAAAGAGGCTGA
Upstream 100 bases:
>100_bases CCTACGCCGGTTTGCGAGCTTGCCGACAGGCTCGACTGATAGTCCTATTAGGCTTGAATCACGCGCTGGCGCTGTGCCGG CCTGACTCAAGGAGTTCGAG
Downstream 100 bases:
>100_bases CGCCTGATTTGCTCCGGGCACGCTTTTCAAGCGTGGGGAACACGGGAGGCAGCAGCAAGAAGACCAGACGGGTTTGCCCG ATAGCGTATGCTGCAGCGAT
Product: signal transduction protein
Products: xanthosine 5'-phosphate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTA RENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSA TGKPPRKQRG
Sequences:
>Translated_170_residues MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTA RENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSA TGKPPRKQRG >Mature_169_residues TTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTAR ENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSAT GKPPRKQRG
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: 1.1.1.205
Molecular weight: Translated: 18064; Mature: 17933
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQ CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHH ELDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIA HHCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH AKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSATGKPPRKQRG CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQ CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHH ELDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIA HHCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH AKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSATGKPPRKQRG CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: inosine 5'-phosphate; NAD+; H2O
Specific reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]