Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhcV [H]

Identifier: 91788058

GI number: 91788058

Start: 2280332

End: 2280844

Strand: Reverse

Name: yhcV [H]

Synonym: Bpro_2185

Alternate gene names: 91788058

Gene position: 2280844-2280332 (Counterclockwise)

Preceding gene: 91788059

Following gene: 91788048

Centisome position: 43.86

GC content: 61.6

Gene sequence:

>513_bases
ATGACAACAGTTTCCGACCTTATGACTCGCGGCGTGCGGACCTTGACGCCCGCCGATACCGTGACATCCGCCGCGCGGGC
CATGGATGAACTCAACGTGGGCGTCATTCCGGTCTGCGACGGCGAGAAGCTGGTGGGCATGGTGACCGACCGCGATATTG
TCGTGCGCGGCGTGGCGCAGGAACTCGATGCAAAGACCACAGACCTGTCGGACTTGATGAGCACGAACGTGCGCACGGCG
CGCGAGAACGAGGACGTGGACGAAGTTCTCAGCGAGATGGCTGAGAGCCAGATTCGCCGGTTACCGGTGGTTGATGATCA
GGATCGGCTGGTCGGAATTATTTCCCTGGGCGATATTGCGGCCAAGGACCCCGATAAAGATGCCGATGTGGCCGCCTCCC
TGGGAAATATCTCGCTGCCAGCCGAGCCGGACCGTTCGAACCAGTCCCGAACCAGCGGTGAAGCGGACGGCAGCTCGGCA
ACCGGAAAGCCGCCACGCAAACAAAGAGGCTGA

Upstream 100 bases:

>100_bases
CCTACGCCGGTTTGCGAGCTTGCCGACAGGCTCGACTGATAGTCCTATTAGGCTTGAATCACGCGCTGGCGCTGTGCCGG
CCTGACTCAAGGAGTTCGAG

Downstream 100 bases:

>100_bases
CGCCTGATTTGCTCCGGGCACGCTTTTCAAGCGTGGGGAACACGGGAGGCAGCAGCAAGAAGACCAGACGGGTTTGCCCG
ATAGCGTATGCTGCAGCGAT

Product: signal transduction protein

Products: xanthosine 5'-phosphate; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTA
RENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSA
TGKPPRKQRG

Sequences:

>Translated_170_residues
MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTA
RENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSA
TGKPPRKQRG
>Mature_169_residues
TTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTAR
ENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAAKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSAT
GKPPRKQRG

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: 1.1.1.205

Molecular weight: Translated: 18064; Mature: 17933

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQ
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHH
ELDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIA
HHCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH
AKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSATGKPPRKQRG
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDGEKLVGMVTDRDIVVRGVAQ
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHH
ELDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIA
HHCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH
AKDPDKDADVAASLGNISLPAEPDRSNQSRTSGEADGSSATGKPPRKQRG
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: inosine 5'-phosphate; NAD+; H2O

Specific reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]