| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iscA [H]
Identifier: 91788053
GI number: 91788053
Start: 2276046
End: 2276369
Strand: Direct
Name: iscA [H]
Synonym: Bpro_2180
Alternate gene names: 91788053
Gene position: 2276046-2276369 (Clockwise)
Preceding gene: 91788052
Following gene: 91788054
Centisome position: 43.77
GC content: 56.79
Gene sequence:
>324_bases ATGTCCGTTACTCTCACCGATGCTGCTGCCCGTCACGTGACCCGCTATATGGCCAAGCGCGGGAAGGGCGTGGGCGTGCG TTTGGGCGTCAAGACCACAGGCTGCTCGGGTCTGGCATACAAGCTTGAATATGCCGACGAGATCGCGCCTGAAGATGTGG TGTTTGAAGACAACGGCGTCAAGGTGCTGGTGGATCCCAAAAGCATGGCCTACATCGACGGCACCCAGCTTGATTTTGTG CGCGAGGGTCTGAACGAAGGCTTCAAGTTCATCAATCCCAACGAGCGTGATCGCTGTGGTTGCGGTGAAAGCTTTCGCGT TTGA
Upstream 100 bases:
>100_bases ACTGCTCCATTCTGGCGGAAGACGCCATCAAGGCTGCCGTGAACGACTACAAGCAAAAGCACGCACACTGATAGTCCTGC CTAATTTTTGAGTCATTGAA
Downstream 100 bases:
>100_bases CGGGCGCACTTGCGCTAGCCCCGACATCCAGTACAGCCGTTTTTGCAGAGCCGCCTTCACTGACTGTGCTGGCGGCTTTT TCTTGACATGAACCTTCACT
Product: iron-sulfur cluster assembly protein IscA
Products: NA
Alternate protein names: Iron-sulfur cluster assembly protein [H]
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSVTLTDAAARHVTRYMAKRGKGVGVRLGVKTTGCSGLAYKLEYADEIAPEDVVFEDNGVKVLVDPKSMAYIDGTQLDFV REGLNEGFKFINPNERDRCGCGESFRV
Sequences:
>Translated_107_residues MSVTLTDAAARHVTRYMAKRGKGVGVRLGVKTTGCSGLAYKLEYADEIAPEDVVFEDNGVKVLVDPKSMAYIDGTQLDFV REGLNEGFKFINPNERDRCGCGESFRV >Mature_106_residues SVTLTDAAARHVTRYMAKRGKGVGVRLGVKTTGCSGLAYKLEYADEIAPEDVVFEDNGVKVLVDPKSMAYIDGTQLDFVR EGLNEGFKFINPNERDRCGCGESFRV
Specific function: Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that iscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transi
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=37.7358490566038, Blast_Score=87, Evalue=3e-18, Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=40.9638554216867, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=68.2242990654206, Blast_Score=162, Evalue=3e-42, Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=53.3333333333333, Blast_Score=117, Evalue=1e-28, Organism=Escherichia coli, GI1786351, Length=110, Percent_Identity=37.2727272727273, Blast_Score=73, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=36.7924528301887, Blast_Score=88, Evalue=7e-19, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=36.7924528301887, Blast_Score=88, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=38.0952380952381, Blast_Score=85, Evalue=2e-18, Organism=Drosophila melanogaster, GI24642263, Length=104, Percent_Identity=40.3846153846154, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR011302 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 11752; Mature: 11621
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTLTDAAARHVTRYMAKRGKGVGVRLGVKTTGCSGLAYKLEYADEIAPEDVVFEDNGV CEEEECHHHHHHHHHHHHHCCCCCEEEEECEECCCCCEEEEEECCCCCCCCCEEEECCCC KVLVDPKSMAYIDGTQLDFVREGLNEGFKFINPNERDRCGCGESFRV EEEECCCCEEEECCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SVTLTDAAARHVTRYMAKRGKGVGVRLGVKTTGCSGLAYKLEYADEIAPEDVVFEDNGV EEEECHHHHHHHHHHHHHCCCCCEEEEECEECCCCCEEEEEECCCCCCCCCEEEECCCC KVLVDPKSMAYIDGTQLDFVREGLNEGFKFINPNERDRCGCGESFRV EEEECCCCEEEECCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA