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The map label for this gene is nifU [H]

Identifier: 91788052

GI number: 91788052

Start: 2275630

End: 2276016

Strand: Direct

Name: nifU [H]

Synonym: Bpro_2179

Alternate gene names: 91788052

Gene position: 2275630-2276016 (Clockwise)

Preceding gene: 91788051

Following gene: 91788053

Centisome position: 43.76

GC content: 54.01

Gene sequence:

>387_bases
ATGGCATACAGCGAAAAAGTGGTAGACCACTATGAAAATCCCCGCAATGTCGGCTCTTTTGAAAAGGGCGACGACTCGGT
AGGTACCGGCATGGTGGGTGCGCCCGCTTGTGGCGACGTGATGAAGCTGCAGATCAAGGTCAATCCGGCCACCGGTGTGA
TCGAAGATGCGCGTTTTAAAACCTATGGTTGTGGTTCTGCGATTGCTTCCAGCTCGCTCGTGACCGAGTGGGTCAAGGGT
AAAACGCTGGACGAAGCGGCAAGTATCAAGAACAGCGCCATTGCTGAAGAACTGGCTTTGCCGCCGGTCAAAATTCACTG
CTCCATTCTGGCGGAAGACGCCATCAAGGCTGCCGTGAACGACTACAAGCAAAAGCACGCACACTGA

Upstream 100 bases:

>100_bases
TTCAAGGATGGGGTTGACCTGTCCACCATCCAGTGGGCTGCCCACTAGACCGGCAGATCCAGCAGATCAGCAGACAAGAC
AGCTTTAAGAGGTAAACAAA

Downstream 100 bases:

>100_bases
TAGTCCTGCCTAATTTTTGAGTCATTGAAATGTCCGTTACTCTCACCGATGCTGCTGCCCGTCACGTGACCCGCTATATG
GCCAAGCGCGGGAAGGGCGT

Product: scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAYSEKVVDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPATGVIEDARFKTYGCGSAIASSSLVTEWVKG
KTLDEAASIKNSAIAEELALPPVKIHCSILAEDAIKAAVNDYKQKHAH

Sequences:

>Translated_128_residues
MAYSEKVVDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPATGVIEDARFKTYGCGSAIASSSLVTEWVKG
KTLDEAASIKNSAIAEELALPPVKIHCSILAEDAIKAAVNDYKQKHAH
>Mature_127_residues
AYSEKVVDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPATGVIEDARFKTYGCGSAIASSSLVTEWVKGK
TLDEAASIKNSAIAEELALPPVKIHCSILAEDAIKAAVNDYKQKHAH

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=124, Percent_Identity=74.1935483870968, Blast_Score=192, Evalue=9e-50,
Organism=Homo sapiens, GI24307953, Length=124, Percent_Identity=73.3870967741936, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI1788878, Length=126, Percent_Identity=83.3333333333333, Blast_Score=218, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI17543474, Length=124, Percent_Identity=70.1612903225807, Blast_Score=187, Evalue=8e-49,
Organism=Saccharomyces cerevisiae, GI6325122, Length=124, Percent_Identity=70.9677419354839, Blast_Score=191, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6324800, Length=123, Percent_Identity=69.1056910569106, Blast_Score=185, Evalue=2e-48,
Organism=Drosophila melanogaster, GI21355597, Length=124, Percent_Identity=73.3870967741936, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011339
- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 13577; Mature: 13446

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSEKVVDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPATGVIEDARFK
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
TYGCGSAIASSSLVTEWVKGKTLDEAASIKNSAIAEELALPPVKIHCSILAEDAIKAAVN
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
DYKQKHAH
HHHHHCCC
>Mature Secondary Structure 
AYSEKVVDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPATGVIEDARFK
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
TYGCGSAIASSSLVTEWVKGKTLDEAASIKNSAIAEELALPPVKIHCSILAEDAIKAAVN
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
DYKQKHAH
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]