| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788028
Identifier: 91788028
GI number: 91788028
Start: 2246607
End: 2247710
Strand: Direct
Name: 91788028
Synonym: Bpro_2155
Alternate gene names: NA
Gene position: 2246607-2247710 (Clockwise)
Preceding gene: 91788026
Following gene: 91788029
Centisome position: 43.2
GC content: 60.78
Gene sequence:
>1104_bases ATGGTCACCAGCGTCAGGCCCATCACCATTCTGGGTGCCGGGCACATTGGTTTTGCCATGGCCGTGCTGCTCAGGCACGT CGGCGACTATGAGATCCTCGTGGCCGACCGAGACTGCAAGCGGCTGAAACCCCTGGCCGCCTTGGGCCTGGATGTGATGG TGGTGAATGACGAGGTCTCGCTGGCCCGTGCCGTGGCTGGGCGTTACGCCGTGCTGAACGCGTTGCCCTTTCATCAGGCC ATTACCGTCTCCGGCCTCTGCGCCAGGGAGCATGTCCATTATTTTGACCTGACCGAAGACATCGGGAGTGCGCAGGCCAT CCGCGGACTGGCGGCGGATGCCACCAGCGTGCTGATGCCCCAGTGCGGGCTGGCGCCGGGTTTCATTGGCATCGTGGGCC ATGATCTTGCGCGCCGGTTTGACCGGCTGCTGGACCTGCACCTGCGCGTGGGTGCCCTGCCGCGCTATTGCCTCAACAGG CTGCGCTACAACCTGACGTGGAGCACCGAAGGACTCATTAACCAATACTGCAATCCGTGCAACGCCATCGTGGACGGCGA GCCCACGCAGGTCATGGCGCTGGAAGGCTACGAGACCTTTGCGCTGGACGGCGTCGAATATGAGGCCTTCAATACATCGG GCGGGCTGGGTACGCTCATGGAGACACTGCACGGGAAGGCGCGCAACGTGGACTACAAATCGGTTCGCTATCCCGGGCAC TGCGCTGTCATTAAGTTGTTGCTGAACGATTTGCGTTTACGGGAACGCCGGGACCTGCTCAAGGATATTCTGGAGGCAGC GATCCCGGCAACGCGTCAGGACGTCATCGTGGTGTTTGCCTCGGCCTCGGGCTATCGCAATCAACGCCTCGTTGAGGAGT CGTATTTCTCGCGAATGGCGGGCGCCGAGATTGACGGAAACTCCCTGACCGCCATACAGTTGACGACGGCTGCCGGCATT TGTACTGCACTGGACCTGGTTGCGAAGGGGGCCTTGCCGCAATCCGGTTTTATTGGACAGGAGCAGATAGCGCTCGACGA ATTCTTGCAGAATCGGTTTGGCCGCATCTGCACCGAAAATTTGACGGAGGCAAGACCTGCATGA
Upstream 100 bases:
>100_bases TCGCGCGGATTTGCAACGCCGCCATGGCGCAAAAGACGCGGTTTTATGTTCCAGATAGCGTGCAACACTGCACTAGCCGC AGGGCATGAAAGGAAAGGGT
Downstream 100 bases:
>100_bases AGGCAAGTGACGCTGAAACCAGAAGGCTGAAACTTGCGTGCAGGTCGCGCTGTCGAGCCGTTGCTGGCCAGCGATCTTCA AGCCGTTCCCGAAACAACGT
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; L-Lysine Dehydrogenase; Saccharopine Reductase; Saccharopine Dehydrogenase Family Protein; Dehydrogenase Protein; Saccharopine Dehydrogenase/Saccharopine Reductase; Saccharopine Dehydrogenase Protein; Saccharopine Dehydrogenase And Related Protein; TrkA-NSaccharopine Dehydrogenase; Oxidoreductase; Saccharopine Dehydrogenase-Like Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA
Sequences:
>Translated_367_residues MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA >Mature_367_residues MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40030; Mature: 40030
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVS CCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHCHHHHHCEEEEEECCHHH LARAVAGRYAVLNALPFHQAITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECHHHHCHHHHHHHHHHHHHHHHCC QCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNRLRYNLTWSTEGLINQYCNPC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCCC NAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH CCCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHCCHHCCCCHHHCCCCCH CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC GAEIDGNSLTAIQLTTAAGICTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTEN CCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTEARPA HHCCCCC >Mature Secondary Structure MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVS CCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHCHHHHHCEEEEEECCHHH LARAVAGRYAVLNALPFHQAITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECHHHHCHHHHHHHHHHHHHHHHCC QCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNRLRYNLTWSTEGLINQYCNPC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCCC NAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH CCCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHCCHHCCCCHHHCCCCCH CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC GAEIDGNSLTAIQLTTAAGICTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTEN CCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTEARPA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA