Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788028

Identifier: 91788028

GI number: 91788028

Start: 2246607

End: 2247710

Strand: Direct

Name: 91788028

Synonym: Bpro_2155

Alternate gene names: NA

Gene position: 2246607-2247710 (Clockwise)

Preceding gene: 91788026

Following gene: 91788029

Centisome position: 43.2

GC content: 60.78

Gene sequence:

>1104_bases
ATGGTCACCAGCGTCAGGCCCATCACCATTCTGGGTGCCGGGCACATTGGTTTTGCCATGGCCGTGCTGCTCAGGCACGT
CGGCGACTATGAGATCCTCGTGGCCGACCGAGACTGCAAGCGGCTGAAACCCCTGGCCGCCTTGGGCCTGGATGTGATGG
TGGTGAATGACGAGGTCTCGCTGGCCCGTGCCGTGGCTGGGCGTTACGCCGTGCTGAACGCGTTGCCCTTTCATCAGGCC
ATTACCGTCTCCGGCCTCTGCGCCAGGGAGCATGTCCATTATTTTGACCTGACCGAAGACATCGGGAGTGCGCAGGCCAT
CCGCGGACTGGCGGCGGATGCCACCAGCGTGCTGATGCCCCAGTGCGGGCTGGCGCCGGGTTTCATTGGCATCGTGGGCC
ATGATCTTGCGCGCCGGTTTGACCGGCTGCTGGACCTGCACCTGCGCGTGGGTGCCCTGCCGCGCTATTGCCTCAACAGG
CTGCGCTACAACCTGACGTGGAGCACCGAAGGACTCATTAACCAATACTGCAATCCGTGCAACGCCATCGTGGACGGCGA
GCCCACGCAGGTCATGGCGCTGGAAGGCTACGAGACCTTTGCGCTGGACGGCGTCGAATATGAGGCCTTCAATACATCGG
GCGGGCTGGGTACGCTCATGGAGACACTGCACGGGAAGGCGCGCAACGTGGACTACAAATCGGTTCGCTATCCCGGGCAC
TGCGCTGTCATTAAGTTGTTGCTGAACGATTTGCGTTTACGGGAACGCCGGGACCTGCTCAAGGATATTCTGGAGGCAGC
GATCCCGGCAACGCGTCAGGACGTCATCGTGGTGTTTGCCTCGGCCTCGGGCTATCGCAATCAACGCCTCGTTGAGGAGT
CGTATTTCTCGCGAATGGCGGGCGCCGAGATTGACGGAAACTCCCTGACCGCCATACAGTTGACGACGGCTGCCGGCATT
TGTACTGCACTGGACCTGGTTGCGAAGGGGGCCTTGCCGCAATCCGGTTTTATTGGACAGGAGCAGATAGCGCTCGACGA
ATTCTTGCAGAATCGGTTTGGCCGCATCTGCACCGAAAATTTGACGGAGGCAAGACCTGCATGA

Upstream 100 bases:

>100_bases
TCGCGCGGATTTGCAACGCCGCCATGGCGCAAAAGACGCGGTTTTATGTTCCAGATAGCGTGCAACACTGCACTAGCCGC
AGGGCATGAAAGGAAAGGGT

Downstream 100 bases:

>100_bases
AGGCAAGTGACGCTGAAACCAGAAGGCTGAAACTTGCGTGCAGGTCGCGCTGTCGAGCCGTTGCTGGCCAGCGATCTTCA
AGCCGTTCCCGAAACAACGT

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: Dehydrogenase; L-Lysine Dehydrogenase; Saccharopine Reductase; Saccharopine Dehydrogenase Family Protein; Dehydrogenase Protein; Saccharopine Dehydrogenase/Saccharopine Reductase; Saccharopine Dehydrogenase Protein; Saccharopine Dehydrogenase And Related Protein; TrkA-NSaccharopine Dehydrogenase; Oxidoreductase; Saccharopine Dehydrogenase-Like Protein

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA
ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR
LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH
CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI
CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA

Sequences:

>Translated_367_residues
MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA
ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR
LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH
CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI
CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA
>Mature_367_residues
MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVSLARAVAGRYAVLNALPFHQA
ITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMPQCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNR
LRYNLTWSTEGLINQYCNPCNAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH
CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMAGAEIDGNSLTAIQLTTAAGI
CTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTENLTEARPA

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40030; Mature: 40030

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVS
CCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHCHHHHHCEEEEEECCHHH
LARAVAGRYAVLNALPFHQAITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECHHHHCHHHHHHHHHHHHHHHHCC
QCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNRLRYNLTWSTEGLINQYCNPC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCCC
NAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH
CCCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHCCHHCCCCHHHCCCCCH
CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC
GAEIDGNSLTAIQLTTAAGICTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTEN
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTEARPA
HHCCCCC
>Mature Secondary Structure
MVTSVRPITILGAGHIGFAMAVLLRHVGDYEILVADRDCKRLKPLAALGLDVMVVNDEVS
CCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHCHHHHHCEEEEEECCHHH
LARAVAGRYAVLNALPFHQAITVSGLCAREHVHYFDLTEDIGSAQAIRGLAADATSVLMP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECHHHHCHHHHHHHHHHHHHHHHCC
QCGLAPGFIGIVGHDLARRFDRLLDLHLRVGALPRYCLNRLRYNLTWSTEGLINQYCNPC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCCC
NAIVDGEPTQVMALEGYETFALDGVEYEAFNTSGGLGTLMETLHGKARNVDYKSVRYPGH
CCCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHCCHHCCCCHHHCCCCCH
CAVIKLLLNDLRLRERRDLLKDILEAAIPATRQDVIVVFASASGYRNQRLVEESYFSRMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC
GAEIDGNSLTAIQLTTAAGICTALDLVAKGALPQSGFIGQEQIALDEFLQNRFGRICTEN
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LTEARPA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA