| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788023
Identifier: 91788023
GI number: 91788023
Start: 2241532
End: 2242089
Strand: Reverse
Name: 91788023
Synonym: Bpro_2150
Alternate gene names: NA
Gene position: 2242089-2241532 (Counterclockwise)
Preceding gene: 91788024
Following gene: 91788020
Centisome position: 43.11
GC content: 64.87
Gene sequence:
>558_bases ATGACCGCGCACCGCCCCGACTGCCTGCAACGTGCCCGCCAGCTGGTTGCGCACCTGCAACTGCGGCCCCATCCCGAGGG CGGCTGGTACCGCGAAGTCTTCCGCTCGGACCTGCAGGTGCAACCTGCGGACGGGCGGCCGGCGCGGCATGCCCTCACGT CCATTTACTTCCTGCTGGAGGCCGGACAGCATTCCCGTTGGCACAAGGTGCTTTCAGATGAGGTCTGGGTATACCTCGAA GGCGCACCGCTTGACCTCTGGGCGTGGGATGCCACCACTCACCAGGCAAGCTGTATCCCGCTGGGTCCCGTCAGTGTTGC AGAGAACCTCGATGGGCCGCTGCCGCGTCAACCCCAACACGTCATTGCGGCAGGCCTCTGGCAGGCCGCCAGACCCCTGG CCGGTCACCCGGATGGCTTCACCCTGGTGGCCTGCATGGTCGGACCGGGCTTCGATTTTTCTGATTTCCAGATGATGCAG GCCGACGGCCACGAGGCCCAGTTGATCAGGCGTGAGCACCCTCACCTCTCGGTCTTCATTGACCACGCTGCTTCATGA
Upstream 100 bases:
>100_bases CGCTGGCCATGGAGGATCTGGAATAGCCTCTGGCTTTATTCCGTGGGACCTCTATGAGGGTCGGTGAAGGCCCCTGCGGA TTTGAGGCAAACTTCGCCCC
Downstream 100 bases:
>100_bases GCAACCCCACGTCTGCAGGGACCTGGTGCGTTCAGCGGTGTGATCCGCCGCGCTTCGTTCGTGTGCGGGCTTAAAAGCCT CCGCTAATGTGCAGCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTAHRPDCLQRARQLVAHLQLRPHPEGGWYREVFRSDLQVQPADGRPARHALTSIYFLLEAGQHSRWHKVLSDEVWVYLE GAPLDLWAWDATTHQASCIPLGPVSVAENLDGPLPRQPQHVIAAGLWQAARPLAGHPDGFTLVACMVGPGFDFSDFQMMQ ADGHEAQLIRREHPHLSVFIDHAAS
Sequences:
>Translated_185_residues MTAHRPDCLQRARQLVAHLQLRPHPEGGWYREVFRSDLQVQPADGRPARHALTSIYFLLEAGQHSRWHKVLSDEVWVYLE GAPLDLWAWDATTHQASCIPLGPVSVAENLDGPLPRQPQHVIAAGLWQAARPLAGHPDGFTLVACMVGPGFDFSDFQMMQ ADGHEAQLIRREHPHLSVFIDHAAS >Mature_184_residues TAHRPDCLQRARQLVAHLQLRPHPEGGWYREVFRSDLQVQPADGRPARHALTSIYFLLEAGQHSRWHKVLSDEVWVYLEG APLDLWAWDATTHQASCIPLGPVSVAENLDGPLPRQPQHVIAAGLWQAARPLAGHPDGFTLVACMVGPGFDFSDFQMMQA DGHEAQLIRREHPHLSVFIDHAAS
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20695; Mature: 20563
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHRPDCLQRARQLVAHLQLRPHPEGGWYREVFRSDLQVQPADGRPARHALTSIYFLLE CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH AGQHSRWHKVLSDEVWVYLEGAPLDLWAWDATTHQASCIPLGPVSVAENLDGPLPRQPQH CCCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCEEECCCHHHHHCCCCCCCCCCHH VIAAGLWQAARPLAGHPDGFTLVACMVGPGFDFSDFQMMQADGHEAQLIRREHPHLSVFI HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEE DHAAS ECCCC >Mature Secondary Structure TAHRPDCLQRARQLVAHLQLRPHPEGGWYREVFRSDLQVQPADGRPARHALTSIYFLLE CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH AGQHSRWHKVLSDEVWVYLEGAPLDLWAWDATTHQASCIPLGPVSVAENLDGPLPRQPQH CCCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCEEECCCHHHHHCCCCCCCCCCHH VIAAGLWQAARPLAGHPDGFTLVACMVGPGFDFSDFQMMQADGHEAQLIRREHPHLSVFI HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEE DHAAS ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA