| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788020
Identifier: 91788020
GI number: 91788020
Start: 2237648
End: 2238520
Strand: Reverse
Name: 91788020
Synonym: Bpro_2147
Alternate gene names: NA
Gene position: 2238520-2237648 (Counterclockwise)
Preceding gene: 91788023
Following gene: 91788019
Centisome position: 43.05
GC content: 63.57
Gene sequence:
>873_bases ATGACGACATCAACACCCACCCTTACCTTCAATCCGCGGCCGTCGCGGCCTCGCCTGCAGCTACCCGTGGGGGCCTGCGA CAGCCACGTCCATGTCTTCGGCCCCGCCGCGCGCTTTCCGTTTGCTGACACTCGCAGCTTCACCCCGGCAGATGCGCCGA AAGAGACGCTGTTTGCCCTGCATCGGTTTCTGGGAATTTCCCGCTGCGTGATCGTGCAGTCAGCCTGCCACGGTTTTGAC AATTCGGTGGTGGAAGACGCGATTGCTGCAGGCGGAGGCCGTTACCTCGGTGTGGCGCTGGTGCCGCACACCGTGCCCGA TGCCGAACTGCGGCGCCTGAAGGCCGCCGGTTTTCGCGGCGTGCGTTTCAACTTCATGGCACACCTGGGGCAAGGCGCCA CGCCGCAGCAGGTGGCGGATTTGACGCACCGCCTGGCGCCGCTGGGCCTGCATTTGCAGGTGCATTTTGAAAGCAGCCTG ATCCATGAGCTGGCGCCAATTCTCAAAACCTCGGCCGTACCGGTGGTGATTGACCATATGGGCCGCGTTGACGCCACGCT GGGGCCTGACCACGCCGATTTCAGCGCGCTCTGCAGCTTGATGGAAGACCCGCGTTTTTACGTCAAGGTCAGCGGTGCGG ACCGCATTGCGCCCGCCCCGCCCTACACCCAAGGCGCGCGACTTGCCCGCCAATTGGTACAAACCTTTCCCGATCGCTGC TTGTGGGGAACCGATTGGCCGCACCCCAACCACACACATGTGCCCGACGACGGCGTGCTGGTGGACCTGCTGCGCGACAT CGCCCCCACGCCCGAGCTGCTGGATCGCCTGCTGGTTCAAAACCCGCAACGCTTTTATCAATTTCCAGCCTGA
Upstream 100 bases:
>100_bases CCCGACAGTGTACCCAGTGATATTGAATATTCAAATAGCTGATATCTGAAAATCATCCAACCAAAACAGAGGCATCGCCG CCAGAATACGGACAAGCACC
Downstream 100 bases:
>100_bases AGCGTCATCAAAAGGATCTCCCCGTGAATGGACGTTTGCAAGACAAGGTAGCGTTGGTAACCGGTGCCGGGTCCGTCGGC CCGGGCTGGGGCAATGGCCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Aminohydrolase; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; PDC Hydrolase-Like Protein; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Exported Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTTSTPTLTFNPRPSRPRLQLPVGACDSHVHVFGPAARFPFADTRSFTPADAPKETLFALHRFLGISRCVIVQSACHGFD NSVVEDAIAAGGGRYLGVALVPHTVPDAELRRLKAAGFRGVRFNFMAHLGQGATPQQVADLTHRLAPLGLHLQVHFESSL IHELAPILKTSAVPVVIDHMGRVDATLGPDHADFSALCSLMEDPRFYVKVSGADRIAPAPPYTQGARLARQLVQTFPDRC LWGTDWPHPNHTHVPDDGVLVDLLRDIAPTPELLDRLLVQNPQRFYQFPA
Sequences:
>Translated_290_residues MTTSTPTLTFNPRPSRPRLQLPVGACDSHVHVFGPAARFPFADTRSFTPADAPKETLFALHRFLGISRCVIVQSACHGFD NSVVEDAIAAGGGRYLGVALVPHTVPDAELRRLKAAGFRGVRFNFMAHLGQGATPQQVADLTHRLAPLGLHLQVHFESSL IHELAPILKTSAVPVVIDHMGRVDATLGPDHADFSALCSLMEDPRFYVKVSGADRIAPAPPYTQGARLARQLVQTFPDRC LWGTDWPHPNHTHVPDDGVLVDLLRDIAPTPELLDRLLVQNPQRFYQFPA >Mature_289_residues TTSTPTLTFNPRPSRPRLQLPVGACDSHVHVFGPAARFPFADTRSFTPADAPKETLFALHRFLGISRCVIVQSACHGFDN SVVEDAIAAGGGRYLGVALVPHTVPDAELRRLKAAGFRGVRFNFMAHLGQGATPQQVADLTHRLAPLGLHLQVHFESSLI HELAPILKTSAVPVVIDHMGRVDATLGPDHADFSALCSLMEDPRFYVKVSGADRIAPAPPYTQGARLARQLVQTFPDRCL WGTDWPHPNHTHVPDDGVLVDLLRDIAPTPELLDRLLVQNPQRFYQFPA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31770; Mature: 31639
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTPTLTFNPRPSRPRLQLPVGACDSHVHVFGPAARFPFADTRSFTPADAPKETLFAL CCCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH HRFLGISRCVIVQSACHGFDNSVVEDAIAAGGGRYLGVALVPHTVPDAELRRLKAAGFRG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCC VRFNFMAHLGQGATPQQVADLTHRLAPLGLHLQVHFESSLIHELAPILKTSAVPVVIDHM HHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCC GRVDATLGPDHADFSALCSLMEDPRFYVKVSGADRIAPAPPYTQGARLARQLVQTFPDRC CCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHC LWGTDWPHPNHTHVPDDGVLVDLLRDIAPTPELLDRLLVQNPQRFYQFPA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure TTSTPTLTFNPRPSRPRLQLPVGACDSHVHVFGPAARFPFADTRSFTPADAPKETLFAL CCCCCEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH HRFLGISRCVIVQSACHGFDNSVVEDAIAAGGGRYLGVALVPHTVPDAELRRLKAAGFRG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCC VRFNFMAHLGQGATPQQVADLTHRLAPLGLHLQVHFESSLIHELAPILKTSAVPVVIDHM HHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCC GRVDATLGPDHADFSALCSLMEDPRFYVKVSGADRIAPAPPYTQGARLARQLVQTFPDRC CCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHC LWGTDWPHPNHTHVPDDGVLVDLLRDIAPTPELLDRLLVQNPQRFYQFPA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA