| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788017
Identifier: 91788017
GI number: 91788017
Start: 2235275
End: 2235796
Strand: Reverse
Name: 91788017
Synonym: Bpro_2144
Alternate gene names: NA
Gene position: 2235796-2235275 (Counterclockwise)
Preceding gene: 91788018
Following gene: 91788016
Centisome position: 42.99
GC content: 62.84
Gene sequence:
>522_bases ATGAGAATCTCACCGATTGCACCGGGCACCCGGCCCGAGCTGGCGGCTATTGAAGCCGGCATTCAGGCCGAACGCGGCCG CGTGTCGCTGCTGTACCAGGTGCTGCTGAACAGCCCGACATTGGCACAGGGCTGGGAGGGCCTTTTGACCGCTGTACGCA ACCGCAGCAGCCTGCCCGCCGACCTGCGCGAGATGATTATCCTGCGCGTTGCGGTGCTGAACCGCGCGCCCTACGAGTTT GAGGCTCATGTCCCGCATGCACTCAAGGCGGGTATGCCACAGGAAAAAATCGACGCCCTGCGTGACTTGCAGCGGCCAGA GGGGCTGACGGGATTTTCAGATCAGGAACGCCGGGTGCTGGCGCTGACCGACGCGATGACACGCGACATCGATGTGCCCG ACAGTGTGTTTGACCCGATCAAGCCCTGCTTCAGTGAGCAGCAGCTGATCGACCTGGTGGCCACCGTGGCCGCCTACAAC ATGGTGTCGCGTTTTCTGGTGGCCCTCAGGATTGGGCACTGA
Upstream 100 bases:
>100_bases CATCCAGCCCGGCTGAGCTCGCGTTGCTGCTGAAAAATGACACGGCCAAATGGGGCCGGGTGATTCGTGACAAAAAGATC AAACCCGAATAGACCCGCTC
Downstream 100 bases:
>100_bases CATGAGCCGCCCGGCCGTTACCAAGGCGAATACCGCAACGCGCAGCGCAGAGGTTACCCAATGAGCGCTGCCACAACCAT CCCGACGGACGCCTTGCTGG
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase Family; Peroxidase-Related Prptein; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN MVSRFLVALRIGH
Sequences:
>Translated_173_residues MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN MVSRFLVALRIGH >Mature_173_residues MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN MVSRFLVALRIGH
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19151; Mature: 19151
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPA CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH DLREMIILRVAVLNRAPYEFEAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVL HHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEH ALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYNMVSRFLVALRIGH HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPA CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH DLREMIILRVAVLNRAPYEFEAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVL HHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEH ALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYNMVSRFLVALRIGH HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA