Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788017

Identifier: 91788017

GI number: 91788017

Start: 2235275

End: 2235796

Strand: Reverse

Name: 91788017

Synonym: Bpro_2144

Alternate gene names: NA

Gene position: 2235796-2235275 (Counterclockwise)

Preceding gene: 91788018

Following gene: 91788016

Centisome position: 42.99

GC content: 62.84

Gene sequence:

>522_bases
ATGAGAATCTCACCGATTGCACCGGGCACCCGGCCCGAGCTGGCGGCTATTGAAGCCGGCATTCAGGCCGAACGCGGCCG
CGTGTCGCTGCTGTACCAGGTGCTGCTGAACAGCCCGACATTGGCACAGGGCTGGGAGGGCCTTTTGACCGCTGTACGCA
ACCGCAGCAGCCTGCCCGCCGACCTGCGCGAGATGATTATCCTGCGCGTTGCGGTGCTGAACCGCGCGCCCTACGAGTTT
GAGGCTCATGTCCCGCATGCACTCAAGGCGGGTATGCCACAGGAAAAAATCGACGCCCTGCGTGACTTGCAGCGGCCAGA
GGGGCTGACGGGATTTTCAGATCAGGAACGCCGGGTGCTGGCGCTGACCGACGCGATGACACGCGACATCGATGTGCCCG
ACAGTGTGTTTGACCCGATCAAGCCCTGCTTCAGTGAGCAGCAGCTGATCGACCTGGTGGCCACCGTGGCCGCCTACAAC
ATGGTGTCGCGTTTTCTGGTGGCCCTCAGGATTGGGCACTGA

Upstream 100 bases:

>100_bases
CATCCAGCCCGGCTGAGCTCGCGTTGCTGCTGAAAAATGACACGGCCAAATGGGGCCGGGTGATTCGTGACAAAAAGATC
AAACCCGAATAGACCCGCTC

Downstream 100 bases:

>100_bases
CATGAGCCGCCCGGCCGTTACCAAGGCGAATACCGCAACGCGCAGCGCAGAGGTTACCCAATGAGCGCTGCCACAACCAT
CCCGACGGACGCCTTGCTGG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase Family; Peroxidase-Related Prptein; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF
EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN
MVSRFLVALRIGH

Sequences:

>Translated_173_residues
MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF
EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN
MVSRFLVALRIGH
>Mature_173_residues
MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPADLREMIILRVAVLNRAPYEF
EAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVLALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYN
MVSRFLVALRIGH

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19151; Mature: 19151

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPA
CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
DLREMIILRVAVLNRAPYEFEAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVL
HHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEH
ALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYNMVSRFLVALRIGH
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRISPIAPGTRPELAAIEAGIQAERGRVSLLYQVLLNSPTLAQGWEGLLTAVRNRSSLPA
CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
DLREMIILRVAVLNRAPYEFEAHVPHALKAGMPQEKIDALRDLQRPEGLTGFSDQERRVL
HHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEH
ALTDAMTRDIDVPDSVFDPIKPCFSEQQLIDLVATVAAYNMVSRFLVALRIGH
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA