Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788018

Identifier: 91788018

GI number: 91788018

Start: 2235805

End: 2236797

Strand: Reverse

Name: 91788018

Synonym: Bpro_2145

Alternate gene names: NA

Gene position: 2236797-2235805 (Counterclockwise)

Preceding gene: 91788019

Following gene: 91788017

Centisome position: 43.01

GC content: 62.84

Gene sequence:

>993_bases
ATGAAAACACGAGACAAGCTCCGCAGAAATATCCTCAGCCTGCTACCAGGCGTCCTGCTGGCCCTTTCCGGGGGCTTCAC
GACAACAAGCGCCATGGCGCAAACCAGCATCACCCGGCTGGTGGTGGCCTTCCCGCCTGGCGGACCGGTGGATTTTGTGG
CGCGCAGCATCAGCGAACAGCTTGGCAAGGAGCTGGGCACCCAGGTGATTGTGGAAAACCGGGCTGGCGCCAACGGCGCC
ATCGCCGCCGACTTTGTCTCACGGGCCGCGCCCGACGGCAGCACCATCTGGCTCACCAGCGTCGGCGCGGTGGCCATCAA
CCCACCGCTGTATGAAAAACTGCCCTACGACCCGGTACGCGATTTGGCCCCGATATCGCTGGTGGCCAACAACGTGGAGC
TGCTGGTGGTCGGCGCCAACAACCCGGCGAAGACTGGCGCTGAATTCATCGCCAATGCCAAACTGCGCAAAGAGGGGGTC
ACCATGGCGTCTTCCGGCACGGGCAGCGTGCCGCACCTGGCCATGGAGCTGCTGGCCGACGCCACCAAAACCAACCTGGT
GCATGTACCGTACAAGGGTGCCGCGCCAGCCATCACCGACGTGATTGCGGGCCATGTGGATGGCTTTTTTGGCGACATTC
CCGGCCTCGTCGGCTTTATCAAGGCAGGCAAGCTCAAGCCCATTGGCATCGCATCGCCCAGGCGCCACCCGCTGCTGCCC
GACGTTAAAACCTTTCAGGAAATGGGCATGGCGGGTGTGGACTCTGACAACTGGTACGCGCTTTTTGCCGGAAAAGCCAC
GCCGGCGGCTGACATAGAGCGCCTCAACCAGGCCATCAGGCGCACGCTGGCCCATGAAGGCGTGCGTGCCAGGCTGCAGG
CCTCGGGCGCTGAGCCTGCGGCATCCAGCCCGGCTGAGCTCGCGTTGCTGCTGAAAAATGACACGGCCAAATGGGGCCGG
GTGATTCGTGACAAAAAGATCAAACCCGAATAG

Upstream 100 bases:

>100_bases
CTTCTGATGAAGCCCGCTTCGTCACCGGTACCGAGCTGGTGGTCGATGGGGGCATGTCGGTTCGATGCGATTAACGGAAT
GAAGGAATGAAGGAAAAATC

Downstream 100 bases:

>100_bases
ACCCGCTCATGAGAATCTCACCGATTGCACCGGGCACCCGGCCCGAGCTGGCGGCTATTGAAGCCGGCATTCAGGCCGAA
CGCGGCCGCGTGTCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKTRDKLRRNILSLLPGVLLALSGGFTTTSAMAQTSITRLVVAFPPGGPVDFVARSISEQLGKELGTQVIVENRAGANGA
IAADFVSRAAPDGSTIWLTSVGAVAINPPLYEKLPYDPVRDLAPISLVANNVELLVVGANNPAKTGAEFIANAKLRKEGV
TMASSGTGSVPHLAMELLADATKTNLVHVPYKGAAPAITDVIAGHVDGFFGDIPGLVGFIKAGKLKPIGIASPRRHPLLP
DVKTFQEMGMAGVDSDNWYALFAGKATPAADIERLNQAIRRTLAHEGVRARLQASGAEPAASSPAELALLLKNDTAKWGR
VIRDKKIKPE

Sequences:

>Translated_330_residues
MKTRDKLRRNILSLLPGVLLALSGGFTTTSAMAQTSITRLVVAFPPGGPVDFVARSISEQLGKELGTQVIVENRAGANGA
IAADFVSRAAPDGSTIWLTSVGAVAINPPLYEKLPYDPVRDLAPISLVANNVELLVVGANNPAKTGAEFIANAKLRKEGV
TMASSGTGSVPHLAMELLADATKTNLVHVPYKGAAPAITDVIAGHVDGFFGDIPGLVGFIKAGKLKPIGIASPRRHPLLP
DVKTFQEMGMAGVDSDNWYALFAGKATPAADIERLNQAIRRTLAHEGVRARLQASGAEPAASSPAELALLLKNDTAKWGR
VIRDKKIKPE
>Mature_330_residues
MKTRDKLRRNILSLLPGVLLALSGGFTTTSAMAQTSITRLVVAFPPGGPVDFVARSISEQLGKELGTQVIVENRAGANGA
IAADFVSRAAPDGSTIWLTSVGAVAINPPLYEKLPYDPVRDLAPISLVANNVELLVVGANNPAKTGAEFIANAKLRKEGV
TMASSGTGSVPHLAMELLADATKTNLVHVPYKGAAPAITDVIAGHVDGFFGDIPGLVGFIKAGKLKPIGIASPRRHPLLP
DVKTFQEMGMAGVDSDNWYALFAGKATPAADIERLNQAIRRTLAHEGVRARLQASGAEPAASSPAELALLLKNDTAKWGR
VIRDKKIKPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34671; Mature: 34671

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRDKLRRNILSLLPGVLLALSGGFTTTSAMAQTSITRLVVAFPPGGPVDFVARSISEQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH
LGKELGTQVIVENRAGANGAIAADFVSRAAPDGSTIWLTSVGAVAINPPLYEKLPYDPVR
HHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCHHHHCCCCHHH
DLAPISLVANNVELLVVGANNPAKTGAEFIANAKLRKEGVTMASSGTGSVPHLAMELLAD
HCCCHHEEECCEEEEEEECCCCHHHHHHHHHCCHHHHCCCEEECCCCCCHHHHHHHHHHH
ATKTNLVHVPYKGAAPAITDVIAGHVDGFFGDIPGLVGFIKAGKLKPIGIASPRRHPLLP
HHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DVKTFQEMGMAGVDSDNWYALFAGKATPAADIERLNQAIRRTLAHEGVRARLQASGAEPA
CHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASSPAELALLLKNDTAKWGRVIRDKKIKPE
CCCCCCEEEEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTRDKLRRNILSLLPGVLLALSGGFTTTSAMAQTSITRLVVAFPPGGPVDFVARSISEQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH
LGKELGTQVIVENRAGANGAIAADFVSRAAPDGSTIWLTSVGAVAINPPLYEKLPYDPVR
HHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCHHHHCCCCHHH
DLAPISLVANNVELLVVGANNPAKTGAEFIANAKLRKEGVTMASSGTGSVPHLAMELLAD
HCCCHHEEECCEEEEEEECCCCHHHHHHHHHCCHHHHCCCEEECCCCCCHHHHHHHHHHH
ATKTNLVHVPYKGAAPAITDVIAGHVDGFFGDIPGLVGFIKAGKLKPIGIASPRRHPLLP
HHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DVKTFQEMGMAGVDSDNWYALFAGKATPAADIERLNQAIRRTLAHEGVRARLQASGAEPA
CHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASSPAELALLLKNDTAKWGRVIRDKKIKPE
CCCCCCEEEEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]