| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788016
Identifier: 91788016
GI number: 91788016
Start: 2234558
End: 2235214
Strand: Reverse
Name: 91788016
Synonym: Bpro_2143
Alternate gene names: NA
Gene position: 2235214-2234558 (Counterclockwise)
Preceding gene: 91788017
Following gene: 91788015
Centisome position: 42.98
GC content: 61.95
Gene sequence:
>657_bases ATGAGCGCTGCCACAACCATCCCGACGGACGCCTTGCTGGTGAAAGCCACACTGTCTCCGGGTAATAACGACCACCTGCC CGACTGCCTGCCGGCCATCATGCAGCACTTGCGAGGCGCCCTGAAGCCATCACCGGCAGAGCTGCACAGCGCTTTTTCTG CCGCACACAAAATGCTGTACATCTATCTGCATTTACCGGAGCGCGTGCCACTCGACAAAGCCGTCGCCACCACGCTGGAG TTGGCGCTTGAAAGGGAATGGCCCCAGCTACAACAGGTATGCGTGTCCCGGCTGCAAAAGGTGTTTGAGGCCAGAGGGGC TTCTGCCGGCAGCAAGCCCGTGTTTCATTACGTGGTCGAGATGGACCCCGAAAGCGGCTGGATGCCCGAGCTGGCGCAGT GGTACGACACCGAGCACATGCCCGGCCTGGCCGCGGTGCCGGGCTGCATCCGCGCTGCACGCTTTCTTAACCACGACCAC GGCCCCCTGTCGCTGGCCTGTTACGACCTGGTGACCGAAGAAACACTGGGTTCGGCACCCTGGCTGGCGGTACGTGCCAC AGACTGGAGCAGCCGCATGAGGCCGCACTTCACCCACACGGTTCGCAGCATGTTCAAAGTACTGCCCGGCAGCCACACCA CAAAATCAGGGACGTAG
Upstream 100 bases:
>100_bases GGTGTCGCGTTTTCTGGTGGCCCTCAGGATTGGGCACTGACATGAGCCGCCCGGCCGTTACCAAGGCGAATACCGCAACG CGCAGCGCAGAGGTTACCCA
Downstream 100 bases:
>100_bases CATGCACAACATCGTTTCCCCACAACGCCGGTACTGGCTCCAACGCACGGCCATGGTCTCGGCGGCAATGGTTTCTCCCT GGCCAGGCCGCGCGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSAATTIPTDALLVKATLSPGNNDHLPDCLPAIMQHLRGALKPSPAELHSAFSAAHKMLYIYLHLPERVPLDKAVATTLE LALEREWPQLQQVCVSRLQKVFEARGASAGSKPVFHYVVEMDPESGWMPELAQWYDTEHMPGLAAVPGCIRAARFLNHDH GPLSLACYDLVTEETLGSAPWLAVRATDWSSRMRPHFTHTVRSMFKVLPGSHTTKSGT
Sequences:
>Translated_218_residues MSAATTIPTDALLVKATLSPGNNDHLPDCLPAIMQHLRGALKPSPAELHSAFSAAHKMLYIYLHLPERVPLDKAVATTLE LALEREWPQLQQVCVSRLQKVFEARGASAGSKPVFHYVVEMDPESGWMPELAQWYDTEHMPGLAAVPGCIRAARFLNHDH GPLSLACYDLVTEETLGSAPWLAVRATDWSSRMRPHFTHTVRSMFKVLPGSHTTKSGT >Mature_217_residues SAATTIPTDALLVKATLSPGNNDHLPDCLPAIMQHLRGALKPSPAELHSAFSAAHKMLYIYLHLPERVPLDKAVATTLEL ALEREWPQLQQVCVSRLQKVFEARGASAGSKPVFHYVVEMDPESGWMPELAQWYDTEHMPGLAAVPGCIRAARFLNHDHG PLSLACYDLVTEETLGSAPWLAVRATDWSSRMRPHFTHTVRSMFKVLPGSHTTKSGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24041; Mature: 23910
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAATTIPTDALLVKATLSPGNNDHLPDCLPAIMQHLRGALKPSPAELHSAFSAAHKMLY CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE IYLHLPERVPLDKAVATTLELALEREWPQLQQVCVSRLQKVFEARGASAGSKPVFHYVVE EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE MDPESGWMPELAQWYDTEHMPGLAAVPGCIRAARFLNHDHGPLSLACYDLVTEETLGSAP ECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC WLAVRATDWSSRMRPHFTHTVRSMFKVLPGSHTTKSGT EEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SAATTIPTDALLVKATLSPGNNDHLPDCLPAIMQHLRGALKPSPAELHSAFSAAHKMLY CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE IYLHLPERVPLDKAVATTLELALEREWPQLQQVCVSRLQKVFEARGASAGSKPVFHYVVE EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE MDPESGWMPELAQWYDTEHMPGLAAVPGCIRAARFLNHDHGPLSLACYDLVTEETLGSAP ECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC WLAVRATDWSSRMRPHFTHTVRSMFKVLPGSHTTKSGT EEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA