Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788015

Identifier: 91788015

GI number: 91788015

Start: 2233558

End: 2234556

Strand: Reverse

Name: 91788015

Synonym: Bpro_2142

Alternate gene names: NA

Gene position: 2234556-2233558 (Counterclockwise)

Preceding gene: 91788016

Following gene: 91788011

Centisome position: 42.97

GC content: 65.67

Gene sequence:

>999_bases
ATGCACAACATCGTTTCCCCACAACGCCGGTACTGGCTCCAACGCACGGCCATGGTCTCGGCGGCAATGGTTTCTCCCTG
GCCAGGCCGCGCGCAGTCGACGTGGCCCAGCAAGCCCATCCGCTTCGTCGTGCCTTTCGTGCCTGGCGGCACCTCCGATA
TCGTGGCCCGCGCTGTGGCCAACGAGCTCACCCGGCAGCTGGGCGTTCCGGTGTTGATTGACAACAAGGCCGGCGGCGGT
GGCGTGCCCGCCATGCAGGAAGTGGCCCGGGCGGCCCCGGACGGCCACACCATCATCCTCGGCCATGTGGGTTCACTGGC
GGTCAACCCTTACATCTTTGCCAACACAGGCTACGACGTGAACCGGGACTTCATGCCTGTGACGCTTCTGGCCAAAATCC
CCAGCCTCTTTGTCATCCACCCCGATGTGCCCGCCCGGGACTTCCGCGAGTTCGTGGCTTACGCCAGGAAGAACCCCGGC
AAGCTGAATTACGCATCGGCCGGCAATGCCAGCGCTGGCCACCTGGCCATGGAGTACCTCAAGCTGGTCACCGGCACCTT
CATGACACATATCCCCTACCGCGGCACCGGACCGGCGCTGACCGACCTGCTGGCAGGGCGGACGCAGGTTTTTTCAGCCG
GAACACCGGCGCTTCTGCCGCATATCCGCAGTGGCCGCCTGCGCGCGATTGCCGTGGGAACGCCGGCCAGACTGCCTGCC
CTGCCGGACGTCCCCACCGTGGCCGAGATGGGCTACCGCAACTTCGAGTCGGTGCAGTGGTACGGCATTCTGGCCCCGGC
CGGCACACCCGTCGAGATTGTCCAGCGTCTGCAGCTGGAGTCGGCCAAGGCGCTGCATTCACCCGCAACGGCTGAGCGCT
TTGCGGGCGACAACGCGACCATCGGCGGGCAGCCGCCGGCAGAATTTGCGGCCTTCATTCGCGGTGAACAGGCCATCTGG
AAGGACATCGTGCGGCAGGCGCGCATCAAGCCTGATTGA

Upstream 100 bases:

>100_bases
ACAGACTGGAGCAGCCGCATGAGGCCGCACTTCACCCACACGGTTCGCAGCATGTTCAAAGTACTGCCCGGCAGCCACAC
CACAAAATCAGGGACGTAGC

Downstream 100 bases:

>100_bases
ACCTCCGCTAAAAATTTGACCGTGACCGATCCGATCTCAAGTCATCAAGCCATCAAGTCAAGTGCCCAATAAAAAAACCC
GCCGGAGCGGGTTTTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MHNIVSPQRRYWLQRTAMVSAAMVSPWPGRAQSTWPSKPIRFVVPFVPGGTSDIVARAVANELTRQLGVPVLIDNKAGGG
GVPAMQEVARAAPDGHTIILGHVGSLAVNPYIFANTGYDVNRDFMPVTLLAKIPSLFVIHPDVPARDFREFVAYARKNPG
KLNYASAGNASAGHLAMEYLKLVTGTFMTHIPYRGTGPALTDLLAGRTQVFSAGTPALLPHIRSGRLRAIAVGTPARLPA
LPDVPTVAEMGYRNFESVQWYGILAPAGTPVEIVQRLQLESAKALHSPATAERFAGDNATIGGQPPAEFAAFIRGEQAIW
KDIVRQARIKPD

Sequences:

>Translated_332_residues
MHNIVSPQRRYWLQRTAMVSAAMVSPWPGRAQSTWPSKPIRFVVPFVPGGTSDIVARAVANELTRQLGVPVLIDNKAGGG
GVPAMQEVARAAPDGHTIILGHVGSLAVNPYIFANTGYDVNRDFMPVTLLAKIPSLFVIHPDVPARDFREFVAYARKNPG
KLNYASAGNASAGHLAMEYLKLVTGTFMTHIPYRGTGPALTDLLAGRTQVFSAGTPALLPHIRSGRLRAIAVGTPARLPA
LPDVPTVAEMGYRNFESVQWYGILAPAGTPVEIVQRLQLESAKALHSPATAERFAGDNATIGGQPPAEFAAFIRGEQAIW
KDIVRQARIKPD
>Mature_332_residues
MHNIVSPQRRYWLQRTAMVSAAMVSPWPGRAQSTWPSKPIRFVVPFVPGGTSDIVARAVANELTRQLGVPVLIDNKAGGG
GVPAMQEVARAAPDGHTIILGHVGSLAVNPYIFANTGYDVNRDFMPVTLLAKIPSLFVIHPDVPARDFREFVAYARKNPG
KLNYASAGNASAGHLAMEYLKLVTGTFMTHIPYRGTGPALTDLLAGRTQVFSAGTPALLPHIRSGRLRAIAVGTPARLPA
LPDVPTVAEMGYRNFESVQWYGILAPAGTPVEIVQRLQLESAKALHSPATAERFAGDNATIGGQPPAEFAAFIRGEQAIW
KDIVRQARIKPD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35723; Mature: 35723

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNIVSPQRRYWLQRTAMVSAAMVSPWPGRAQSTWPSKPIRFVVPFVPGGTSDIVARAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
NELTRQLGVPVLIDNKAGGGGVPAMQEVARAAPDGHTIILGHVGSLAVNPYIFANTGYDV
HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCEEEECCCCCC
NRDFMPVTLLAKIPSLFVIHPDVPARDFREFVAYARKNPGKLNYASAGNASAGHLAMEYL
CCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHH
KLVTGTFMTHIPYRGTGPALTDLLAGRTQVFSAGTPALLPHIRSGRLRAIAVGTPARLPA
HHHHHHHHHCCCCCCCCHHHHHHHHCCHHEECCCCCHHHHHCCCCCEEEEEECCCCCCCC
LPDVPTVAEMGYRNFESVQWYGILAPAGTPVEIVQRLQLESAKALHSPATAERFAGDNAT
CCCCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
IGGQPPAEFAAFIRGEQAIWKDIVRQARIKPD
CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHNIVSPQRRYWLQRTAMVSAAMVSPWPGRAQSTWPSKPIRFVVPFVPGGTSDIVARAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
NELTRQLGVPVLIDNKAGGGGVPAMQEVARAAPDGHTIILGHVGSLAVNPYIFANTGYDV
HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCEEEECCCCCC
NRDFMPVTLLAKIPSLFVIHPDVPARDFREFVAYARKNPGKLNYASAGNASAGHLAMEYL
CCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHH
KLVTGTFMTHIPYRGTGPALTDLLAGRTQVFSAGTPALLPHIRSGRLRAIAVGTPARLPA
HHHHHHHHHCCCCCCCCHHHHHHHHCCHHEECCCCCHHHHHCCCCCEEEEEECCCCCCCC
LPDVPTVAEMGYRNFESVQWYGILAPAGTPVEIVQRLQLESAKALHSPATAERFAGDNAT
CCCCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
IGGQPPAEFAAFIRGEQAIWKDIVRQARIKPD
CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]