Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pht3 [H]

Identifier: 91788006

GI number: 91788006

Start: 2223956

End: 2225410

Strand: Reverse

Name: pht3 [H]

Synonym: Bpro_2133

Alternate gene names: 91788006

Gene position: 2225410-2223956 (Counterclockwise)

Preceding gene: 91788008

Following gene: 91788005

Centisome position: 42.79

GC content: 64.88

Gene sequence:

>1455_bases
ATGAATGCAGAACAAAACGAACTGATCACCCGGATCGGCCCGGGCACTCCCTGCGGGCAGCTGATGCGCCAGTATTGGCA
ACCGGTGGCGCTGGTCGACGAATTCAACCCCAGCCAGGACCCGCGCATGGACAAGCGCCCGGTCAAGGCGGTGCGCGTGC
TGGGCCAGGACCTGGTGCTGTTCAGTGACGCCAGCAACACCTGGGGCCTGCTGGACCGCGACTGTCCGCACCGCGGGGCC
GACCTGTCATTTGGCCGGCGCGAGAGCCTTGAACAGGGTGGTGGCCTGCGCTGCCCGTTTCACGGCTGGAAGTTTGCAGC
TGATGGCCGCTGCCTGGAGACGCCGGCCGAGCCCACGGGCAGCAAGCTGTGCGAACGCATCAGACAGCGCAGCTACCCGG
TGATCGAAAAAAGCGGCGTGCTGTTTGCCTGGCTGGGTGACGAGGGCAGCACACCCCCGCCCTTCCCGGCGTTTGACTGC
TTTGCCGCACCGGCCACCCACAGCTTTGCCTTCAAGGGCCTGTGGAACGCCAACTGGCTGCAGGCCTTTGAAGTAGGCAT
TGACCCGGCGCATCCCTCCTTCCTGCACCGTTTTCTGCAGGACGAGCCGCTGGACGAGATCGGCCAGAACGCAGCGGGCA
AACAGTTCCGCAGTGCGAGCGCCGGCGCCATGGATGGCGAGCAATGGCCGATGACGCGCATCATGCGCGAATTTGCGCAG
CCCGACATCAGCTTTGAAACCAGACCGTGGGGCATGCAGCTCACCGCGTTGCGGCCCATGACCGACAAGCTGACCCATGT
GCGCGTGACCCAGGCCATCTTCCCGGCCACCTTTGTGATTCCGCTGTCGGAAACCATGACGATCACGCAGATGCACCTGC
CCGTGGACGACACGCATACCTACTGGTATTCCTTCTTCACCAGCTTTGCCGGGCCGCTGGACAAGGAGAGCATGCGCGCG
CAGCGCCAGCAGTTCATCTCGCTACCCGACTACATCCCCAAGGCCGGCAGCCATAACCGGTGGGGCTTTGATGCCGAGGA
ACAGTTGAGCCAGACCTATCTGGGCATGGGCGAGGACGATATCAACGTGCATGACCAGTGGGCCGTGGAAAGCATGGGCC
CGATTGCCGACCGCACGCGCGAGCACCTGGGCACCACCGACAAGGTCATCATGGTCAACCGGCGGGTGCTGATCAAGGCC
ATCGCCACGGTGCAGGCCGGCGGTGTTGCGCCGGGTATCGCCGACGCAGCACAGGCCGCAGCCATGACCGGGCCGGACAC
GGTGGACGGCATTGCACCAGCCGGTGCGTGGCCCGACTGGTGGCGCGAGCAGGTGCGGACCAAGCGTGACGGTGCGCCTT
GGACGGGCAGCCCTCACCCCAACCCTCTCCCAGAGGGAGAGGGAGCCAAGATTCCTGCTTTCATTCCCTCTCCCTCTGGG
AGCAGGCTGGGGTGA

Upstream 100 bases:

>100_bases
GTTTCTTGCAAGCTCATGATGATGACTGTACACTGAATTCAAATTTCGGTATACCGTTTTCACACCCCCCACCTGATCAC
CCCCATCCCGCAGGACATCC

Downstream 100 bases:

>100_bases
GGGCCGTGCCCACCTTCGCGCAGCTCTGCGGAATCCGCGATGCCGCACGCCAGCAAGCGCTGGAACACACCTCCGGGCTG
ATCACTGCCAGCGACCTGGA

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MNAEQNELITRIGPGTPCGQLMRQYWQPVALVDEFNPSQDPRMDKRPVKAVRVLGQDLVLFSDASNTWGLLDRDCPHRGA
DLSFGRRESLEQGGGLRCPFHGWKFAADGRCLETPAEPTGSKLCERIRQRSYPVIEKSGVLFAWLGDEGSTPPPFPAFDC
FAAPATHSFAFKGLWNANWLQAFEVGIDPAHPSFLHRFLQDEPLDEIGQNAAGKQFRSASAGAMDGEQWPMTRIMREFAQ
PDISFETRPWGMQLTALRPMTDKLTHVRVTQAIFPATFVIPLSETMTITQMHLPVDDTHTYWYSFFTSFAGPLDKESMRA
QRQQFISLPDYIPKAGSHNRWGFDAEEQLSQTYLGMGEDDINVHDQWAVESMGPIADRTREHLGTTDKVIMVNRRVLIKA
IATVQAGGVAPGIADAAQAAAMTGPDTVDGIAPAGAWPDWWREQVRTKRDGAPWTGSPHPNPLPEGEGAKIPAFIPSPSG
SRLG

Sequences:

>Translated_484_residues
MNAEQNELITRIGPGTPCGQLMRQYWQPVALVDEFNPSQDPRMDKRPVKAVRVLGQDLVLFSDASNTWGLLDRDCPHRGA
DLSFGRRESLEQGGGLRCPFHGWKFAADGRCLETPAEPTGSKLCERIRQRSYPVIEKSGVLFAWLGDEGSTPPPFPAFDC
FAAPATHSFAFKGLWNANWLQAFEVGIDPAHPSFLHRFLQDEPLDEIGQNAAGKQFRSASAGAMDGEQWPMTRIMREFAQ
PDISFETRPWGMQLTALRPMTDKLTHVRVTQAIFPATFVIPLSETMTITQMHLPVDDTHTYWYSFFTSFAGPLDKESMRA
QRQQFISLPDYIPKAGSHNRWGFDAEEQLSQTYLGMGEDDINVHDQWAVESMGPIADRTREHLGTTDKVIMVNRRVLIKA
IATVQAGGVAPGIADAAQAAAMTGPDTVDGIAPAGAWPDWWREQVRTKRDGAPWTGSPHPNPLPEGEGAKIPAFIPSPSG
SRLG
>Mature_484_residues
MNAEQNELITRIGPGTPCGQLMRQYWQPVALVDEFNPSQDPRMDKRPVKAVRVLGQDLVLFSDASNTWGLLDRDCPHRGA
DLSFGRRESLEQGGGLRCPFHGWKFAADGRCLETPAEPTGSKLCERIRQRSYPVIEKSGVLFAWLGDEGSTPPPFPAFDC
FAAPATHSFAFKGLWNANWLQAFEVGIDPAHPSFLHRFLQDEPLDEIGQNAAGKQFRSASAGAMDGEQWPMTRIMREFAQ
PDISFETRPWGMQLTALRPMTDKLTHVRVTQAIFPATFVIPLSETMTITQMHLPVDDTHTYWYSFFTSFAGPLDKESMRA
QRQQFISLPDYIPKAGSHNRWGFDAEEQLSQTYLGMGEDDINVHDQWAVESMGPIADRTREHLGTTDKVIMVNRRVLIKA
IATVQAGGVAPGIADAAQAAAMTGPDTVDGIAPAGAWPDWWREQVRTKRDGAPWTGSPHPNPLPEGEGAKIPAFIPSPSG
SRLG

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=171, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.12.7 [H]

Molecular weight: Translated: 53609; Mature: 53609

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEQNELITRIGPGTPCGQLMRQYWQPVALVDEFNPSQDPRMDKRPVKAVRVLGQDLVL
CCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCHHHHHHHHHHCCCEEE
FSDASNTWGLLDRDCPHRGADLSFGRRESLEQGGGLRCPFHGWKFAADGRCLETPAEPTG
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCEECCCCCEECCCCCCCH
SKLCERIRQRSYPVIEKSGVLFAWLGDEGSTPPPFPAFDCFAAPATHSFAFKGLWNANWL
HHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCHHH
QAFEVGIDPAHPSFLHRFLQDEPLDEIGQNAAGKQFRSASAGAMDGEQWPMTRIMREFAQ
HHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC
PDISFETRPWGMQLTALRPMTDKLTHVRVTQAIFPATFVIPLSETMTITQMHLPVDDTHT
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCHH
YWYSFFTSFAGPLDKESMRAQRQQFISLPDYIPKAGSHNRWGFDAEEQLSQTYLGMGEDD
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
INVHDQWAVESMGPIADRTREHLGTTDKVIMVNRRVLIKAIATVQAGGVAPGIADAAQAA
CCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
AMTGPDTVDGIAPAGAWPDWWREQVRTKRDGAPWTGSPHPNPLPEGEGAKIPAFIPSPSG
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
SRLG
CCCC
>Mature Secondary Structure
MNAEQNELITRIGPGTPCGQLMRQYWQPVALVDEFNPSQDPRMDKRPVKAVRVLGQDLVL
CCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCHHHHHHHHHHCCCEEE
FSDASNTWGLLDRDCPHRGADLSFGRRESLEQGGGLRCPFHGWKFAADGRCLETPAEPTG
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCEECCCCCEECCCCCCCH
SKLCERIRQRSYPVIEKSGVLFAWLGDEGSTPPPFPAFDCFAAPATHSFAFKGLWNANWL
HHHHHHHHHCCCCEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCHHH
QAFEVGIDPAHPSFLHRFLQDEPLDEIGQNAAGKQFRSASAGAMDGEQWPMTRIMREFAQ
HHHHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCC
PDISFETRPWGMQLTALRPMTDKLTHVRVTQAIFPATFVIPLSETMTITQMHLPVDDTHT
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCHH
YWYSFFTSFAGPLDKESMRAQRQQFISLPDYIPKAGSHNRWGFDAEEQLSQTYLGMGEDD
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
INVHDQWAVESMGPIADRTREHLGTTDKVIMVNRRVLIKAIATVQAGGVAPGIADAAQAA
CCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
AMTGPDTVDGIAPAGAWPDWWREQVRTKRDGAPWTGSPHPNPLPEGEGAKIPAFIPSPSG
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
SRLG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA