| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 91788005
GI number: 91788005
Start: 2222463
End: 2223959
Strand: Reverse
Name: glnA [H]
Synonym: Bpro_2132
Alternate gene names: 91788005
Gene position: 2223959-2222463 (Counterclockwise)
Preceding gene: 91788006
Following gene: 91788004
Centisome position: 42.77
GC content: 67.67
Gene sequence:
>1497_bases GTGAGGGCCGTGCCCACCTTCGCGCAGCTCTGCGGAATCCGCGATGCCGCACGCCAGCAAGCGCTGGAACACACCTCCGG GCTGATCACTGCCAGCGACCTGGAGCTGGTGCGTTTTGCGTGGTGCGACCTGCACGGTGTCACACGCGGTAAAACCCTGG TGGCCGGCGCCGCCGCAAAGGCCATGCAGGAAGGCGTGGGCCTGGTCAGCACCCTGGTCCTCAAGGACACCTCGGACCGC AGCACGGCATTCAAAGTATTCGAGCGTGGCGGCCCCGCCGGGTTGCCGGGCTTCGAGTTCGCCAGCAACCTGCTGCTGCT GGCCGACCCGTCAAGCTTTCGGCAACTGCCCTGGACGCCCGCCACCGGCTGGGTTCAGGGCCAGCTCTGGTTTCAAAACG GCCAGCCGGTGGAGCTGGACACGCGCCGCGTGCTGCAGCAGGCGCTCGCCGGCCTGGCGCGGGCCGGCTACGGCATGAAG TGCGGGCTCGAAGTCGAATTCCACATTTACAAGATCACCGAGGAAGGCACCCGGGACCAGCTGGACCCCAACCAGGCCGG CTGGCCCGGTTTGCCGCCGCAGGTCAGCCTGGTTCACCCGGGCTACAACATGCTGACCGAGGGCTGGTACGACCTGGCCG AAGAGCCCTTGCGCATCGTGCAGCACACGGCGCAGGCGCTGGGCCTGCCCTTGCTGTCGCTCGAGATCGAGTTGGGCCCC AGCCAGGTGGAAGCAGTGTTCGAAGCCACCGACGCGCTGACAGCTGCCGACAACATGGTGCTGTTTCGCAATGCGGTCAA GCAGGCGCTGCGCCGGGCGGGCTACCACGCCAGCTTCATGTGCCGCCCGCCGTTTGCCAACATCATGTCCAGCGGCTGGC ACCTGCACCAGTCGCTGGTCGACAGTGAAACCGGCCGCAATGTGTTTCAGCGCGAAGCGCCGGCCCCGGGCAGCACGGCA GCCGATGCCCGGCACACGCTGTCGGAGACGGGCGAGCACTACCTGGCCGGCCTGCTGGCGCATGCGCGTGGCATGGCCGT GTTCTGCACGCCCACCATCAACGGCTTTGGCCGCTACCGCCCGAATGCGCTGGCGCCGCAGGCTGTGCTCTGGGGCCGCG ACAACCGCGGCGCCATGCTGCGTGTGGTGGGCCAGTGCGGTGACGGCGCCACGCGCATTGAAAACCGCATCGGCGAGCCC GCCGCCAACCCCTACCTGTACCTGGCCTCGCAGATTCATGCCGGGCTCGACGGCATCACGCGCCGGCTGAAGGCGCCGCC CGCCACCGATGCACCCTATGGGGCTAGCGGCACCCTGCTGCCCACCAGCCTGGGCGAAGCGCTGGAGGCCCTGCAAACGG ACCCGATTCTGGTCAAGGCCTTTGGCAGCGCCTTTGTCGACTACCTCGTGCGCGTCAAGCGGTCCGAGCTGGACCGCTAT GCGCAAGCTGAAGACAAGGACGACTGGCAGCGCCGTGAATATTTCAGCCGGATTTGA
Upstream 100 bases:
>100_bases GTGCGCCTTGGACGGGCAGCCCTCACCCCAACCCTCTCCCAGAGGGAGAGGGAGCCAAGATTCCTGCTTTCATTCCCTCT CCCTCTGGGAGCAGGCTGGG
Downstream 100 bases:
>100_bases ACGCCTTCTTCAACACTTCATGATTACCATTAACTTCATAGCTTCCGACGGACAACTGACAGGGGCTACAGCCCAAACGG GCAAGAGCCTGATGCAGGCC
Product: L-glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MRAVPTFAQLCGIRDAARQQALEHTSGLITASDLELVRFAWCDLHGVTRGKTLVAGAAAKAMQEGVGLVSTLVLKDTSDR STAFKVFERGGPAGLPGFEFASNLLLLADPSSFRQLPWTPATGWVQGQLWFQNGQPVELDTRRVLQQALAGLARAGYGMK CGLEVEFHIYKITEEGTRDQLDPNQAGWPGLPPQVSLVHPGYNMLTEGWYDLAEEPLRIVQHTAQALGLPLLSLEIELGP SQVEAVFEATDALTAADNMVLFRNAVKQALRRAGYHASFMCRPPFANIMSSGWHLHQSLVDSETGRNVFQREAPAPGSTA ADARHTLSETGEHYLAGLLAHARGMAVFCTPTINGFGRYRPNALAPQAVLWGRDNRGAMLRVVGQCGDGATRIENRIGEP AANPYLYLASQIHAGLDGITRRLKAPPATDAPYGASGTLLPTSLGEALEALQTDPILVKAFGSAFVDYLVRVKRSELDRY AQAEDKDDWQRREYFSRI
Sequences:
>Translated_498_residues MRAVPTFAQLCGIRDAARQQALEHTSGLITASDLELVRFAWCDLHGVTRGKTLVAGAAAKAMQEGVGLVSTLVLKDTSDR STAFKVFERGGPAGLPGFEFASNLLLLADPSSFRQLPWTPATGWVQGQLWFQNGQPVELDTRRVLQQALAGLARAGYGMK CGLEVEFHIYKITEEGTRDQLDPNQAGWPGLPPQVSLVHPGYNMLTEGWYDLAEEPLRIVQHTAQALGLPLLSLEIELGP SQVEAVFEATDALTAADNMVLFRNAVKQALRRAGYHASFMCRPPFANIMSSGWHLHQSLVDSETGRNVFQREAPAPGSTA ADARHTLSETGEHYLAGLLAHARGMAVFCTPTINGFGRYRPNALAPQAVLWGRDNRGAMLRVVGQCGDGATRIENRIGEP AANPYLYLASQIHAGLDGITRRLKAPPATDAPYGASGTLLPTSLGEALEALQTDPILVKAFGSAFVDYLVRVKRSELDRY AQAEDKDDWQRREYFSRI >Mature_498_residues MRAVPTFAQLCGIRDAARQQALEHTSGLITASDLELVRFAWCDLHGVTRGKTLVAGAAAKAMQEGVGLVSTLVLKDTSDR STAFKVFERGGPAGLPGFEFASNLLLLADPSSFRQLPWTPATGWVQGQLWFQNGQPVELDTRRVLQQALAGLARAGYGMK CGLEVEFHIYKITEEGTRDQLDPNQAGWPGLPPQVSLVHPGYNMLTEGWYDLAEEPLRIVQHTAQALGLPLLSLEIELGP SQVEAVFEATDALTAADNMVLFRNAVKQALRRAGYHASFMCRPPFANIMSSGWHLHQSLVDSETGRNVFQREAPAPGSTA ADARHTLSETGEHYLAGLLAHARGMAVFCTPTINGFGRYRPNALAPQAVLWGRDNRGAMLRVVGQCGDGATRIENRIGEP AANPYLYLASQIHAGLDGITRRLKAPPATDAPYGASGTLLPTSLGEALEALQTDPILVKAFGSAFVDYLVRVKRSELDRY AQAEDKDDWQRREYFSRI
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=483, Percent_Identity=27.536231884058, Blast_Score=163, Evalue=4e-40, Organism=Escherichia coli, GI1790301, Length=234, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI87081870, Length=363, Percent_Identity=23.4159779614325, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 54245; Mature: 54245
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVPTFAQLCGIRDAARQQALEHTSGLITASDLELVRFAWCDLHGVTRGKTLVAGAAAK CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHH AMQEGVGLVSTLVLKDTSDRSTAFKVFERGGPAGLPGFEFASNLLLLADPSSFRQLPWTP HHHHCHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHCCCCCCC ATGWVQGQLWFQNGQPVELDTRRVLQQALAGLARAGYGMKCGLEVEFHIYKITEEGTRDQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECEEEEEEEEEEECCCCCCC LDPNQAGWPGLPPQVSLVHPGYNMLTEGWYDLAEEPLRIVQHTAQALGLPLLSLEIELGP CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCH SQVEAVFEATDALTAADNMVLFRNAVKQALRRAGYHASFMCRPPFANIMSSGWHLHQSLV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHH DSETGRNVFQREAPAPGSTAADARHTLSETGEHYLAGLLAHARGMAVFCTPTINGFGRYR HHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PNALAPQAVLWGRDNRGAMLRVVGQCGDGATRIENRIGEPAANPYLYLASQIHAGLDGIT CCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHH RRLKAPPATDAPYGASGTLLPTSLGEALEALQTDPILVKAFGSAFVDYLVRVKRSELDRY HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQAEDKDDWQRREYFSRI HCCCCCHHHHHHHHHHCC >Mature Secondary Structure MRAVPTFAQLCGIRDAARQQALEHTSGLITASDLELVRFAWCDLHGVTRGKTLVAGAAAK CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHH AMQEGVGLVSTLVLKDTSDRSTAFKVFERGGPAGLPGFEFASNLLLLADPSSFRQLPWTP HHHHCHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHCCCCCCC ATGWVQGQLWFQNGQPVELDTRRVLQQALAGLARAGYGMKCGLEVEFHIYKITEEGTRDQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECEEEEEEEEEEECCCCCCC LDPNQAGWPGLPPQVSLVHPGYNMLTEGWYDLAEEPLRIVQHTAQALGLPLLSLEIELGP CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCH SQVEAVFEATDALTAADNMVLFRNAVKQALRRAGYHASFMCRPPFANIMSSGWHLHQSLV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHH DSETGRNVFQREAPAPGSTAADARHTLSETGEHYLAGLLAHARGMAVFCTPTINGFGRYR HHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PNALAPQAVLWGRDNRGAMLRVVGQCGDGATRIENRIGEPAANPYLYLASQIHAGLDGIT CCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHH RRLKAPPATDAPYGASGTLLPTSLGEALEALQTDPILVKAFGSAFVDYLVRVKRSELDRY HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQAEDKDDWQRREYFSRI HCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7916055 [H]