Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is hosA [H]

Identifier: 91788002

GI number: 91788002

Start: 2221247

End: 2221693

Strand: Direct

Name: hosA [H]

Synonym: Bpro_2129

Alternate gene names: 91788002

Gene position: 2221247-2221693 (Clockwise)

Preceding gene: 91787993

Following gene: 91788007

Centisome position: 42.71

GC content: 63.09

Gene sequence:

>447_bases
ATGGCAAAAAGCTTTGATTTCAGCGACGCCCCGGGGCACCTCATTCGCCGGGCACAACAACTTGCAGTGGCGATCTTCAT
GGAGGAGACGGCGGGTTTTGACGCGACGCCGGTGCAGTTTGCCATCCTGAACGCGCTGATGGATGACCCTGGCGAAGATC
AGATCACGCTGTCAGGGCGGGTGGCGTTCGACCCGGCCACTTTTGGCTCGGTGATCGGGCGGCTTGAAGCCAAAGGCTGG
GTCAAGCGCGAGGCGGATCCGGGCGACAGGCGCCGCAAACTGCTGTGGATCACGCCCGAAGGGGAGAAGGTTGCGCTGCA
GATGAAACGCGCGGTGAACCGGGCCCAGCAGCGCATTGTGGGCCCACTGGATCCTGACGAGCGGGCACAACTGGGCGCGC
TGCTCGGCAAGATGATCGCCGGGCACGAAAAAGCTGCCAGGCAATGA

Upstream 100 bases:

>100_bases
GGTTCGGGAATAGCCCGGGAAATACCAGGGCGCCCCTAAATGATAAGTATACATATCATTTATCGACTTGGTATTTACCC
TGAACGTTTAAACTCCGCAC

Downstream 100 bases:

>100_bases
TGGCATCTCAATGATGGCATTCTGAAGGCAGTAAATAAGAAAGACAAAGAAAAGCGGGGCAGAACAACCCCGCTTTTTTT
GGTCGAACGGTTGGCTCAGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAKSFDFSDAPGHLIRRAQQLAVAIFMEETAGFDATPVQFAILNALMDDPGEDQITLSGRVAFDPATFGSVIGRLEAKGW
VKREADPGDRRRKLLWITPEGEKVALQMKRAVNRAQQRIVGPLDPDERAQLGALLGKMIAGHEKAARQ

Sequences:

>Translated_148_residues
MAKSFDFSDAPGHLIRRAQQLAVAIFMEETAGFDATPVQFAILNALMDDPGEDQITLSGRVAFDPATFGSVIGRLEAKGW
VKREADPGDRRRKLLWITPEGEKVALQMKRAVNRAQQRIVGPLDPDERAQLGALLGKMIAGHEKAARQ
>Mature_147_residues
AKSFDFSDAPGHLIRRAQQLAVAIFMEETAGFDATPVQFAILNALMDDPGEDQITLSGRVAFDPATFGSVIGRLEAKGWV
KREADPGDRRRKLLWITPEGEKVALQMKRAVNRAQQRIVGPLDPDERAQLGALLGKMIAGHEKAARQ

Specific function: Involved in the temperature-dependent positive control of flagellum-driven swimming motility and cellular aggregation. Regulates fliC expression by directly interacting with fliC promoter [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16251; Mature: 16120

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSFDFSDAPGHLIRRAQQLAVAIFMEETAGFDATPVQFAILNALMDDPGEDQITLSGR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCE
VAFDPATFGSVIGRLEAKGWVKREADPGDRRRKLLWITPEGEKVALQMKRAVNRAQQRIV
EEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
GPLDPDERAQLGALLGKMIAGHEKAARQ
CCCCCCHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
AKSFDFSDAPGHLIRRAQQLAVAIFMEETAGFDATPVQFAILNALMDDPGEDQITLSGR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCE
VAFDPATFGSVIGRLEAKGWVKREADPGDRRRKLLWITPEGEKVALQMKRAVNRAQQRIV
EEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
GPLDPDERAQLGALLGKMIAGHEKAARQ
CCCCCCHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]