Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is gsiC [H]

Identifier: 91787985

GI number: 91787985

Start: 2202011

End: 2202991

Strand: Direct

Name: gsiC [H]

Synonym: Bpro_2112

Alternate gene names: 91787985

Gene position: 2202011-2202991 (Clockwise)

Preceding gene: 91787982

Following gene: 91787986

Centisome position: 42.34

GC content: 60.45

Gene sequence:

>981_bases
ATGCTTGCTTTTATTTTGCGCCGCCTGATTCAGGCCGTGATCGTGATGATCGTGGTTGCCTTTATTGCCTTCATGCTGTT
TCAGTATGTGGGCGATCCCGTGGTGTTCCTGCTGGGGCAGGATGCAACGCCCGCGCAAATCAAGCAGCTGCGCACCGATC
TGGGACTCGACCAGTCGTTCTTCGTGCAGTTCTGGCATTTCCTGCTCAATGCCGCACGAGGCGAATTTGGCCTGAGCCTG
CGCCAGGGTGCGAAGGTGTCGCGACTGATTTCCGAACGCTTTCCCGCCACGCTGGAACTTGCGCTGGTCGCAGCCCTCAT
GGCGCTGCTGATCGGCATCCCCATGGGTGTTTATTCGGCGCTGCGCCGCGGCTCGTTCCTGAGCCAGATGTTCATGACGA
TCTCGCTGCTCGGCGTCTCGCTGCCGACCTTCCTGATCGGCATCCTGCTGATCCTGGTGTTTTCCGTGGGCCTGGGCTGG
TTCCCGAGCTTCGGCCGCGGCGAGACGGTGCAACTCGGCTGGTGGAGCACCGGCCTGGCCAAGGCCGATGGCTGGCATCA
CGTCGTGTTGCCGGCCGTGACGCTGGCGATCTTCCAGCTCACGCTGATCATGCGGCTGGTGCGCGCCGAGATGCTCGAAG
TGCTGCGCACCGATTACATCAAGTTTGCCCGCGCTCGGGGTCTTTCCAATCGGGCCATTCACTTTGGCCATGCACTCAAA
AACACGCTGGTGCCGGTGATGACCATTACCGGCTTGCAACTGGGCGGCCTGATCGCTTTCGCCATCATCACCGAGACCGT
GTTCCAGTGGCCCGGCATGGGCCTGCTGTTCATCCAGGCCGTGACCTTTGCCGACATTCCGGTGATGGCGGCCTATCTGT
GTCTGATTGCGCTGATTTTTGTGCTCATCAACCTGGTCGTTGATCTCTTGTATTTTGTGGTGGACCCCAGGCTGCGCGTT
GGCCATGCTGGGGGCCACTGA

Upstream 100 bases:

>100_bases
CGCTTGGGTGAGGTGCTTTTTTTCTTTAACCCTAAAGTAAACCCTTGTGTCGGCACGGCACTTGCTCTGCTAGTATCCAC
CGGAACTTTTCTATTGACTG

Downstream 100 bases:

>100_bases
TGCTGGCCTGCCACTGAATCATTGAGCCGACAATTTTTACCCACCCCAAGCCCTCATCTCTTCCATAAGGAGTTCCCGAT
GAAATTCAAGCCAAACCTGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLAFILRRLIQAVIVMIVVAFIAFMLFQYVGDPVVFLLGQDATPAQIKQLRTDLGLDQSFFVQFWHFLLNAARGEFGLSL
RQGAKVSRLISERFPATLELALVAALMALLIGIPMGVYSALRRGSFLSQMFMTISLLGVSLPTFLIGILLILVFSVGLGW
FPSFGRGETVQLGWWSTGLAKADGWHHVVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVLINLVVDLLYFVVDPRLRV
GHAGGH

Sequences:

>Translated_326_residues
MLAFILRRLIQAVIVMIVVAFIAFMLFQYVGDPVVFLLGQDATPAQIKQLRTDLGLDQSFFVQFWHFLLNAARGEFGLSL
RQGAKVSRLISERFPATLELALVAALMALLIGIPMGVYSALRRGSFLSQMFMTISLLGVSLPTFLIGILLILVFSVGLGW
FPSFGRGETVQLGWWSTGLAKADGWHHVVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVLINLVVDLLYFVVDPRLRV
GHAGGH
>Mature_326_residues
MLAFILRRLIQAVIVMIVVAFIAFMLFQYVGDPVVFLLGQDATPAQIKQLRTDLGLDQSFFVQFWHFLLNAARGEFGLSL
RQGAKVSRLISERFPATLELALVAALMALLIGIPMGVYSALRRGSFLSQMFMTISLLGVSLPTFLIGILLILVFSVGLGW
FPSFGRGETVQLGWWSTGLAKADGWHHVVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVLINLVVDLLYFVVDPRLRV
GHAGGH

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=37.5, Blast_Score=231, Evalue=4e-62,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=37.5, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1789888, Length=330, Percent_Identity=34.8484848484849, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI1787761, Length=334, Percent_Identity=38.0239520958084, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787497, Length=322, Percent_Identity=30.1242236024845, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=33.5820895522388, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1788504, Length=287, Percent_Identity=29.2682926829268, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35987; Mature: 35987

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFILRRLIQAVIVMIVVAFIAFMLFQYVGDPVVFLLGQDATPAQIKQLRTDLGLDQSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHH
FVQFWHFLLNAARGEFGLSLRQGAKVSRLISERFPATLELALVAALMALLIGIPMGVYSA
HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
LRRGSFLSQMFMTISLLGVSLPTFLIGILLILVFSVGLGWFPSFGRGETVQLGWWSTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
KADGWHHVVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLINLVVDLLYFVVDPRLRVGHAGGH
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLAFILRRLIQAVIVMIVVAFIAFMLFQYVGDPVVFLLGQDATPAQIKQLRTDLGLDQSF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHH
FVQFWHFLLNAARGEFGLSLRQGAKVSRLISERFPATLELALVAALMALLIGIPMGVYSA
HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
LRRGSFLSQMFMTISLLGVSLPTFLIGILLILVFSVGLGWFPSFGRGETVQLGWWSTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
KADGWHHVVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLINLVVDLLYFVVDPRLRVGHAGGH
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]