| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yehV [C]
Identifier: 91787982
GI number: 91787982
Start: 2198663
End: 2199142
Strand: Direct
Name: yehV [C]
Synonym: Bpro_2109
Alternate gene names: 91787982
Gene position: 2198663-2199142 (Clockwise)
Preceding gene: 91787981
Following gene: 91787985
Centisome position: 42.28
GC content: 54.58
Gene sequence:
>480_bases TTGGAGAAAACCCTTCCCCCCATCCCCGCAAAACGCTACTTCACCATTGGTGAGGTCAGTGATTTGTGCGGCGTCAAGCC TCATGTTCTCCGTTACTGGGAGCAGGAGTTCACGCAACTGCGTCCGATGAAAAGACGCGGTAACCGCCGCTATTACCAGC ACCATGAAGTGCTGATGATCCGCAGAATTCGCGATCTGCTGTATGACCAGGGTTTCACCATCAGCGGTGCCCGCAACAAG CTGCAGGAAATTGTTCAGGCTGAACGAGACAAACGACGCAACGGCGAAGTCATGCTGGAGGGCCTGGAAGTTCTCGAAGT GAGCGACTCCGTACTGGAGGATTTTGGCGACTCTATTGACTTTCAGGACAGCGAAGCCGAGAACACTGACCTGTCCACCG CCAGCGCTGCGCTGCAAAGACTTCAACTGGTGCGACGCGAACTCTTCGAAATACGCGATCTACTTAGCTCGACCAGCTAG
Upstream 100 bases:
>100_bases TGTGACATAACAACACATTTCAAAAAACTGCTATAACCCTTTGCGCTTACTTTCTACTTAGAGTAGATTTGGAGGTTTCC TCCTTAGCGCATTGATTTAA
Downstream 100 bases:
>100_bases AAGCTGTCTGGGCCGCGTTATAATCTAAAGCTTGTCGGTGTGTGGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGG GGTCGAAGGTTCGAATCCTT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator Protein; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; MerR Family Regulatory Protein; Transcriptional Regulator MerR; Transcriptional Regulator Protein MerR Family; TRANSCRIPTIONal REGULATOR MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Regulatory Protein Merr; Transcriptional Regulator Domain-Containing Protein; MerR Family Regulatory Family; MerR Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS
Sequences:
>Translated_159_residues MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS >Mature_159_residues MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18616; Mature: 18616
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI CCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RRIRDLLYDQGFTISGARNKLQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSID HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC FQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI CCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RRIRDLLYDQGFTISGARNKLQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSID HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC FQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA