Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yehV [C]

Identifier: 91787982

GI number: 91787982

Start: 2198663

End: 2199142

Strand: Direct

Name: yehV [C]

Synonym: Bpro_2109

Alternate gene names: 91787982

Gene position: 2198663-2199142 (Clockwise)

Preceding gene: 91787981

Following gene: 91787985

Centisome position: 42.28

GC content: 54.58

Gene sequence:

>480_bases
TTGGAGAAAACCCTTCCCCCCATCCCCGCAAAACGCTACTTCACCATTGGTGAGGTCAGTGATTTGTGCGGCGTCAAGCC
TCATGTTCTCCGTTACTGGGAGCAGGAGTTCACGCAACTGCGTCCGATGAAAAGACGCGGTAACCGCCGCTATTACCAGC
ACCATGAAGTGCTGATGATCCGCAGAATTCGCGATCTGCTGTATGACCAGGGTTTCACCATCAGCGGTGCCCGCAACAAG
CTGCAGGAAATTGTTCAGGCTGAACGAGACAAACGACGCAACGGCGAAGTCATGCTGGAGGGCCTGGAAGTTCTCGAAGT
GAGCGACTCCGTACTGGAGGATTTTGGCGACTCTATTGACTTTCAGGACAGCGAAGCCGAGAACACTGACCTGTCCACCG
CCAGCGCTGCGCTGCAAAGACTTCAACTGGTGCGACGCGAACTCTTCGAAATACGCGATCTACTTAGCTCGACCAGCTAG

Upstream 100 bases:

>100_bases
TGTGACATAACAACACATTTCAAAAAACTGCTATAACCCTTTGCGCTTACTTTCTACTTAGAGTAGATTTGGAGGTTTCC
TCCTTAGCGCATTGATTTAA

Downstream 100 bases:

>100_bases
AAGCTGTCTGGGCCGCGTTATAATCTAAAGCTTGTCGGTGTGTGGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGG
GGTCGAAGGTTCGAATCCTT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator Protein; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; MerR Family Regulatory Protein; Transcriptional Regulator MerR; Transcriptional Regulator Protein MerR Family; TRANSCRIPTIONal REGULATOR MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Regulatory Protein Merr; Transcriptional Regulator Domain-Containing Protein; MerR Family Regulatory Family; MerR Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK
LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS

Sequences:

>Translated_159_residues
MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK
LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS
>Mature_159_residues
MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNK
LQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSIDFQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18616; Mature: 18616

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRIRDLLYDQGFTISGARNKLQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSID
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI
CCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRIRDLLYDQGFTISGARNKLQEIVQAERDKRRNGEVMLEGLEVLEVSDSVLEDFGDSID
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FQDSEAENTDLSTASAALQRLQLVRRELFEIRDLLSSTS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA