| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yetK [H]
Identifier: 91787972
GI number: 91787972
Start: 2187245
End: 2188192
Strand: Reverse
Name: yetK [H]
Synonym: Bpro_2099
Alternate gene names: 91787972
Gene position: 2188192-2187245 (Counterclockwise)
Preceding gene: 91787983
Following gene: 91787961
Centisome position: 42.08
GC content: 62.24
Gene sequence:
>948_bases ATGAATCGCCTTGTGGCCTACACCTGCCTCGCGCTCAGCATGTCTCTCGTGGGCAGCTATGTGGCGCTTTCCAAACCCTT GGTGGTCGTCCTGCCGGTCTTCCTGCTGGCCTGGCTGCGCTTTGGCATCGGCGGCACCGCCATGCTGCACTGGCTCAAAA AACCGATTGAAGAAACACCCATGAGCAGCCAGACGCGACGCCTGCTATTTCTGGAGTCCTTCCTGGGTAACTTCATGTTT TCCATCTGCATGCTGTTTGGCGTCAGCATGACCAGCGCGGTCGCGGCAGGCGTCATCATGGCCTCCATCCCCGCGGCCGT GGCCCTGATGAGCTGGCTGTTCCTGCGCGAGCGCATTGGCCTGCGGGTGTGGAGCGCGGTGGCCTGCGCGGTGATCGGCA TCGGCCTGGTTTCGCTATCAAAAAATGAGCTTCCTGCACCCGGGCATATTGGGTCAGCAGGCGATATTGCATCAAAAACA TCGTGGCTGGGCAACCTGCTGCTGGTAGGCGCCGTGCTGTGCGAGGCGGCCTATGCCGTGATCGGAAAAAAACTCACCGG CGTGCTCAGCCCCAAGCGCATCACCGCACTCATCAACCTGTGGGGCTTTGCCCTGATCACGCCGCTGGGGCTGTGGATGG CCTGGAGCTTCGACTTTGCCCGTGTGGAGACCTCCAGCTGGCTGCTGCTGCTGTTTTATTCACTGGCGGCCAGCGTGTGG ACGGTGTGGCTGTGGATGACCGGGCTGAAGACCATCCCCGCCAACCAGGCCGGTGTATTCACGGTGATGCTGCCCGTCAG CGCCGCAGCAGTGGGTGTCATCGTGCTGGGCGAAACACTGAACGGCACCCAGATGGGCGCATTCGCCATTGCATTGGCCG GCGTGGTGCTGGCTACCCTGCCCGGGCGGGGTCGGGGAAGCTCTGTTCAAGTCGAGCCGCCGCACTGA
Upstream 100 bases:
>100_bases AAGGCATCATTTCAACCTGCGCATGCCAGCCGCATGACAGTCAGGTCAGCAACTCAACCCGACTGGCCGCAAGGCCGGTA CAACAGGAAACCCCAGTTTA
Downstream 100 bases:
>100_bases TTTCACGGTCCAGCCGTTTCTGCCGGCGCATCACATAGATGCTGTACGTGATGATGCCCAGCGAAACCACGGCAATCAGG ATAGTCGCAGCCGCATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNRLVAYTCLALSMSLVGSYVALSKPLVVVLPVFLLAWLRFGIGGTAMLHWLKKPIEETPMSSQTRRLLFLESFLGNFMF SICMLFGVSMTSAVAAGVIMASIPAAVALMSWLFLRERIGLRVWSAVACAVIGIGLVSLSKNELPAPGHIGSAGDIASKT SWLGNLLLVGAVLCEAAYAVIGKKLTGVLSPKRITALINLWGFALITPLGLWMAWSFDFARVETSSWLLLLFYSLAASVW TVWLWMTGLKTIPANQAGVFTVMLPVSAAAVGVIVLGETLNGTQMGAFAIALAGVVLATLPGRGRGSSVQVEPPH
Sequences:
>Translated_315_residues MNRLVAYTCLALSMSLVGSYVALSKPLVVVLPVFLLAWLRFGIGGTAMLHWLKKPIEETPMSSQTRRLLFLESFLGNFMF SICMLFGVSMTSAVAAGVIMASIPAAVALMSWLFLRERIGLRVWSAVACAVIGIGLVSLSKNELPAPGHIGSAGDIASKT SWLGNLLLVGAVLCEAAYAVIGKKLTGVLSPKRITALINLWGFALITPLGLWMAWSFDFARVETSSWLLLLFYSLAASVW TVWLWMTGLKTIPANQAGVFTVMLPVSAAAVGVIVLGETLNGTQMGAFAIALAGVVLATLPGRGRGSSVQVEPPH >Mature_315_residues MNRLVAYTCLALSMSLVGSYVALSKPLVVVLPVFLLAWLRFGIGGTAMLHWLKKPIEETPMSSQTRRLLFLESFLGNFMF SICMLFGVSMTSAVAAGVIMASIPAAVALMSWLFLRERIGLRVWSAVACAVIGIGLVSLSKNELPAPGHIGSAGDIASKT SWLGNLLLVGAVLCEAAYAVIGKKLTGVLSPKRITALINLWGFALITPLGLWMAWSFDFARVETSSWLLLLFYSLAASVW TVWLWMTGLKTIPANQAGVFTVMLPVSAAAVGVIVLGETLNGTQMGAFAIALAGVVLATLPGRGRGSSVQVEPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33497; Mature: 33497
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLVAYTCLALSMSLVGSYVALSKPLVVVLPVFLLAWLRFGIGGTAMLHWLKKPIEETP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC MSSQTRRLLFLESFLGNFMFSICMLFGVSMTSAVAAGVIMASIPAAVALMSWLFLRERIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRVWSAVACAVIGIGLVSLSKNELPAPGHIGSAGDIASKTSWLGNLLLVGAVLCEAAYAV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IGKKLTGVLSPKRITALINLWGFALITPLGLWMAWSFDFARVETSSWLLLLFYSLAASVW HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHH TVWLWMTGLKTIPANQAGVFTVMLPVSAAAVGVIVLGETLNGTQMGAFAIALAGVVLATL HHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHC PGRGRGSSVQVEPPH CCCCCCCEEEECCCC >Mature Secondary Structure MNRLVAYTCLALSMSLVGSYVALSKPLVVVLPVFLLAWLRFGIGGTAMLHWLKKPIEETP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC MSSQTRRLLFLESFLGNFMFSICMLFGVSMTSAVAAGVIMASIPAAVALMSWLFLRERIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRVWSAVACAVIGIGLVSLSKNELPAPGHIGSAGDIASKTSWLGNLLLVGAVLCEAAYAV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IGKKLTGVLSPKRITALINLWGFALITPLGLWMAWSFDFARVETSSWLLLLFYSLAASVW HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHH TVWLWMTGLKTIPANQAGVFTVMLPVSAAAVGVIVLGETLNGTQMGAFAIALAGVVLATL HHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHC PGRGRGSSVQVEPPH CCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]