Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787961

Identifier: 91787961

GI number: 91787961

Start: 2172835

End: 2173863

Strand: Reverse

Name: 91787961

Synonym: Bpro_2088

Alternate gene names: NA

Gene position: 2173863-2172835 (Counterclockwise)

Preceding gene: 91787972

Following gene: 91787956

Centisome position: 41.8

GC content: 63.85

Gene sequence:

>1029_bases
ATGAAAATCGATGGACGCAAACTTGACCGGGCGACGCAAGCGCACTTGCGCAGACAAGTGGTGCTGGCGGTGCGAGGTGG
CATGACGCAGGCCGAGGCCGCGCGGGTGCATGGACTGAGCCTGCGAGCGGTGCAAAAGGCCTGTGCGCGAGCGCGCGAAG
GCTCGCTGCGAGCGCTCAAGGGCGATGCACGGGGCCGCCCGGCGGGCCACACGCTGCTCAGCCAAGCGCAGCAGGCCAAG
GTGCGCGGCATCATCCTGGGCAAACTGCCCGACCAGCTCAAGCTGCCCTTCTATCTGTGGACTCGCCAAGCCGTCGCGCA
GCTGGCCAAGCGCGAGTGTGGAGTCGATCTGTCGCCCACGACCGTGGGCCGCTATCTCAAGGACTGGGGCATGACGGCGC
AAAAGCCCGTGCGCCGCGCCTATGAGCGCAACGACGCGGCCATTGCGGCCTGGCTTGCCGAGCAATACCCCCTGATTGCC
AAGCAGGCCAAGCGCGAGGGCGCCCAGATTTACTGGGGCGACGAGATGGGGCTGCGCAGCGATCACGTCAGCGGCAAGAG
CTACGCGCCGGCGGGCCAGACGCCGCTGATTCGGGCCACCGGTCAGCGCTTTGGCTGCAACATGATCTCGGCCATCACCA
ACAAAGGGGCCTTGGCCTTCATGGTCTTCGAGGGCAAGTTCAGGGCACCGCTGTTCGTTGAGTTTCTGCGCCGATTGCTC
AAGCAAGTCGAAGGCAAGATCTGTCTGATCGTGGACGGTCATCCGGTTCACAAGTCCGGCGTCGTCAAGAGGTTTGTGCA
AGCCAACGCGCAGCGGCTGCGCCTGATCTTGCTGCCGGGCTACTGCCCCGAACTCAACCCGGACGAGTTGCTCAACCAGG
ATGTCAAGACCAATGCGCTGGGCAAGAGCCGGCCGGCCAACAAGAGCGAAATGATCAAGGCCGTGCGCAGCCATCTGCAC
CGTCGCCAGAAGCAGCCCACGATCATTCGCAATCTGTTCAAAGAAAAACATGTCCGGTACGCCGCGTGA

Upstream 100 bases:

>100_bases
CGACCGGTCACACCGGCCTTCTGCCGCGCAAACTCCTGGCCGCAATACGGTTCAGTTACTGATCTGTGCACAAAATAGTG
CGGTAAAGCGTTAAGGATTG

Downstream 100 bases:

>100_bases
TTCGTTACGCACTATTTATGGGCCGGCTCAGTAAGTTATTCACCCTGAATCGGAATGTCGGAATGACCAAAACCTTGACT
TGTCATTGCGGGCCTGACCC

Product: putative transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives-Like Protein; ISXo7 Transposase; Transposase And Inactivated Derivatives; ISXoo2 Transposase; Helix-Turn-Helix Type; Transposase Of IS; Phosphoadenosine Phosphosulfate Reductase; Cation Diffusion Facilitator Family Transporter; Transposase ISC; Isxo7 Transposase; ISAfe6 Transposase Degenerate; Transposase IS; Integrase Catalytic Region

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKIDGRKLDRATQAHLRRQVVLAVRGGMTQAEAARVHGLSLRAVQKACARAREGSLRALKGDARGRPAGHTLLSQAQQAK
VRGIILGKLPDQLKLPFYLWTRQAVAQLAKRECGVDLSPTTVGRYLKDWGMTAQKPVRRAYERNDAAIAAWLAEQYPLIA
KQAKREGAQIYWGDEMGLRSDHVSGKSYAPAGQTPLIRATGQRFGCNMISAITNKGALAFMVFEGKFRAPLFVEFLRRLL
KQVEGKICLIVDGHPVHKSGVVKRFVQANAQRLRLILLPGYCPELNPDELLNQDVKTNALGKSRPANKSEMIKAVRSHLH
RRQKQPTIIRNLFKEKHVRYAA

Sequences:

>Translated_342_residues
MKIDGRKLDRATQAHLRRQVVLAVRGGMTQAEAARVHGLSLRAVQKACARAREGSLRALKGDARGRPAGHTLLSQAQQAK
VRGIILGKLPDQLKLPFYLWTRQAVAQLAKRECGVDLSPTTVGRYLKDWGMTAQKPVRRAYERNDAAIAAWLAEQYPLIA
KQAKREGAQIYWGDEMGLRSDHVSGKSYAPAGQTPLIRATGQRFGCNMISAITNKGALAFMVFEGKFRAPLFVEFLRRLL
KQVEGKICLIVDGHPVHKSGVVKRFVQANAQRLRLILLPGYCPELNPDELLNQDVKTNALGKSRPANKSEMIKAVRSHLH
RRQKQPTIIRNLFKEKHVRYAA
>Mature_342_residues
MKIDGRKLDRATQAHLRRQVVLAVRGGMTQAEAARVHGLSLRAVQKACARAREGSLRALKGDARGRPAGHTLLSQAQQAK
VRGIILGKLPDQLKLPFYLWTRQAVAQLAKRECGVDLSPTTVGRYLKDWGMTAQKPVRRAYERNDAAIAAWLAEQYPLIA
KQAKREGAQIYWGDEMGLRSDHVSGKSYAPAGQTPLIRATGQRFGCNMISAITNKGALAFMVFEGKFRAPLFVEFLRRLL
KQVEGKICLIVDGHPVHKSGVVKRFVQANAQRLRLILLPGYCPELNPDELLNQDVKTNALGKSRPANKSEMIKAVRSHLH
RRQKQPTIIRNLFKEKHVRYAA

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38201; Mature: 38201

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDGRKLDRATQAHLRRQVVLAVRGGMTQAEAARVHGLSLRAVQKACARAREGSLRALK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEC
GDARGRPAGHTLLSQAQQAKVRGIILGKLPDQLKLPFYLWTRQAVAQLAKRECGVDLSPT
CCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCHH
TVGRYLKDWGMTAQKPVRRAYERNDAAIAAWLAEQYPLIAKQAKREGAQIYWGDEMGLRS
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCC
DHVSGKSYAPAGQTPLIRATGQRFGCNMISAITNKGALAFMVFEGKFRAPLFVEFLRRLL
CCCCCCCCCCCCCCCEEEECCCHHCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
KQVEGKICLIVDGHPVHKSGVVKRFVQANAQRLRLILLPGYCPELNPDELLNQDVKTNAL
HHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHEEEEEECCCCCCCCHHHHHCCCHHHCCC
GKSRPANKSEMIKAVRSHLHRRQKQPTIIRNLFKEKHVRYAA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIDGRKLDRATQAHLRRQVVLAVRGGMTQAEAARVHGLSLRAVQKACARAREGSLRALK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEC
GDARGRPAGHTLLSQAQQAKVRGIILGKLPDQLKLPFYLWTRQAVAQLAKRECGVDLSPT
CCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCHH
TVGRYLKDWGMTAQKPVRRAYERNDAAIAAWLAEQYPLIAKQAKREGAQIYWGDEMGLRS
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCC
DHVSGKSYAPAGQTPLIRATGQRFGCNMISAITNKGALAFMVFEGKFRAPLFVEFLRRLL
CCCCCCCCCCCCCCCEEEECCCHHCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
KQVEGKICLIVDGHPVHKSGVVKRFVQANAQRLRLILLPGYCPELNPDELLNQDVKTNAL
HHHCCCEEEEECCCCCCHHHHHHHHHHCCHHHEEEEEECCCCCCCCHHHHHCCCHHHCCC
GKSRPANKSEMIKAVRSHLHRRQKQPTIIRNLFKEKHVRYAA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA