| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is echA8 [H]
Identifier: 91787966
GI number: 91787966
Start: 2180288
End: 2181157
Strand: Direct
Name: echA8 [H]
Synonym: Bpro_2093
Alternate gene names: 91787966
Gene position: 2180288-2181157 (Clockwise)
Preceding gene: 91787965
Following gene: 91787967
Centisome position: 41.93
GC content: 62.64
Gene sequence:
>870_bases ATGAGCGGCGCCATTTTGCTGGAAAGGCTGGGCCCGGTTGCGACAGTAACCCTGTCGCACCCTGGCAAGCTCAATGCCAT GTCGCGAGCGATGTGGCGTGAGTTGCGGACTGCGTTCGAGCAGCTCCAGTGCGGTGGCGACGTGACCTGCGTGCTGGTAC GCGGCGACCGTGCGCCCGCCAGCGCAGAGGGTGTCGGCCACTTTTGCGCCGGGGGCGATATCTCCGAATATGCTGATTTC CGCTTCGACGAAGCCAGCTTGCGCAACTTCCATGAAAACGAGGTCTGGGGCGGCCTGCAGGCGATGCTTGACTGCGACAT TCCCATCGTTGCCCAGATCGAGGGCAACTGCATGGGGGCCGGCATGGAGATCGCCAGTTGCTGCGACATCCGCATTGCCA GCGAGACGGCCCGTTTTGGTGCGCCAATTGCCAAACTGGGCTTTCCCATGGCCCCGCGCGAGGCGGCGTTGGTGATGCGC GCTGCCGGCGAGCTGACGGCACGTGAAATGCTGCTGTCGGCAGCGGTGCTGGACGCGGCTGAGATGAAGCAGCGCGGTTT TCTCAGCCAGGTCGTGCCGGCGGGTGAGGTCGCCCATGCGGCGCTGGCGTATGCGGGCCGCATCAGCCAGCTGGCTCCTC AGGCGGCGCGTCTGAACAAGCAGACTTTCAGGGCGTTGACTCCCAGCCTCGCTGCGCAACCCATTGCAGAATTAATAGCG GGCGCCTATGACTACGCGAACGCAGCCGAACACCGCGAGGGCGTGATGGCCTTTGTTGAAAAACGCCAGCCCCGTTTTTG TCAGCCCCGTTTAATGGCTGCACTTTCCGAATTCCCAACCTTCGACAGCCCGATCCATGAAAAACCATAA
Upstream 100 bases:
>100_bases CCACGCTTTTCACTTCGTGTAATGCGCTGCCCCCCGAGGGGGCTAATTTTCCTAGGGGCTGCCCGTCGGAAAATTGCATA CTTCCCACACTTTTCATACG
Downstream 100 bases:
>100_bases CCTGTTTGCGGCACTGCGTGCCGCCTTTCCTGCCTCGCTGGATGACGTCGCCGTTGAAACCGACCATGGCCTGTTCTATA CATGGCGCGACCTCGACCGC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSGAILLERLGPVATVTLSHPGKLNAMSRAMWRELRTAFEQLQCGGDVTCVLVRGDRAPASAEGVGHFCAGGDISEYADF RFDEASLRNFHENEVWGGLQAMLDCDIPIVAQIEGNCMGAGMEIASCCDIRIASETARFGAPIAKLGFPMAPREAALVMR AAGELTAREMLLSAAVLDAAEMKQRGFLSQVVPAGEVAHAALAYAGRISQLAPQAARLNKQTFRALTPSLAAQPIAELIA GAYDYANAAEHREGVMAFVEKRQPRFCQPRLMAALSEFPTFDSPIHEKP
Sequences:
>Translated_289_residues MSGAILLERLGPVATVTLSHPGKLNAMSRAMWRELRTAFEQLQCGGDVTCVLVRGDRAPASAEGVGHFCAGGDISEYADF RFDEASLRNFHENEVWGGLQAMLDCDIPIVAQIEGNCMGAGMEIASCCDIRIASETARFGAPIAKLGFPMAPREAALVMR AAGELTAREMLLSAAVLDAAEMKQRGFLSQVVPAGEVAHAALAYAGRISQLAPQAARLNKQTFRALTPSLAAQPIAELIA GAYDYANAAEHREGVMAFVEKRQPRFCQPRLMAALSEFPTFDSPIHEKP >Mature_288_residues SGAILLERLGPVATVTLSHPGKLNAMSRAMWRELRTAFEQLQCGGDVTCVLVRGDRAPASAEGVGHFCAGGDISEYADFR FDEASLRNFHENEVWGGLQAMLDCDIPIVAQIEGNCMGAGMEIASCCDIRIASETARFGAPIAKLGFPMAPREAALVMRA AGELTAREMLLSAAVLDAAEMKQRGFLSQVVPAGEVAHAALAYAGRISQLAPQAARLNKQTFRALTPSLAAQPIAELIAG AYDYANAAEHREGVMAFVEKRQPRFCQPRLMAALSEFPTFDSPIHEKP
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=259, Percent_Identity=26.6409266409266, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI194097323, Length=269, Percent_Identity=27.5092936802974, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4502327, Length=246, Percent_Identity=27.2357723577236, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1787659, Length=268, Percent_Identity=29.1044776119403, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87082183, Length=263, Percent_Identity=26.9961977186312, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=25.2873563218391, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI221142681, Length=271, Percent_Identity=25.830258302583, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17554946, Length=269, Percent_Identity=29.368029739777, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25145438, Length=267, Percent_Identity=28.0898876404494, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17549921, Length=228, Percent_Identity=27.1929824561404, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17535521, Length=229, Percent_Identity=26.6375545851528, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17540714, Length=273, Percent_Identity=24.5421245421245, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17536985, Length=225, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17534483, Length=210, Percent_Identity=25.7142857142857, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17540306, Length=254, Percent_Identity=26.3779527559055, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17560910, Length=260, Percent_Identity=23.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129971, Length=254, Percent_Identity=26.3779527559055, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24653477, Length=254, Percent_Identity=26.3779527559055, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24653139, Length=272, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI19920382, Length=219, Percent_Identity=25.1141552511416, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 31006; Mature: 30875
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAILLERLGPVATVTLSHPGKLNAMSRAMWRELRTAFEQLQCGGDVTCVLVRGDRAPA CCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SAEGVGHFCAGGDISEYADFRFDEASLRNFHENEVWGGLQAMLDCDIPIVAQIEGNCMGA CCCCCCCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GMEIASCCDIRIASETARFGAPIAKLGFPMAPREAALVMRAAGELTAREMLLSAAVLDAA CCHHHHHHCEEECCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMKQRGFLSQVVPAGEVAHAALAYAGRISQLAPQAARLNKQTFRALTPSLAAQPIAELIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHH GAYDYANAAEHREGVMAFVEKRQPRFCQPRLMAALSEFPTFDSPIHEKP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SGAILLERLGPVATVTLSHPGKLNAMSRAMWRELRTAFEQLQCGGDVTCVLVRGDRAPA CCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC SAEGVGHFCAGGDISEYADFRFDEASLRNFHENEVWGGLQAMLDCDIPIVAQIEGNCMGA CCCCCCCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GMEIASCCDIRIASETARFGAPIAKLGFPMAPREAALVMRAAGELTAREMLLSAAVLDAA CCHHHHHHCEEECCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMKQRGFLSQVVPAGEVAHAALAYAGRISQLAPQAARLNKQTFRALTPSLAAQPIAELIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHH GAYDYANAAEHREGVMAFVEKRQPRFCQPRLMAALSEFPTFDSPIHEKP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]