Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787962

Identifier: 91787962

GI number: 91787962

Start: 2174069

End: 2176561

Strand: Direct

Name: 91787962

Synonym: Bpro_2089

Alternate gene names: NA

Gene position: 2174069-2176561 (Clockwise)

Preceding gene: 91787960

Following gene: 91787963

Centisome position: 41.81

GC content: 58.04

Gene sequence:

>2493_bases
ATGAAAGAAAAAGAACTTCGGTTGGCCGTTGTTTTCTTCGGCGGCGTATCGCTGGCGATTTACCAGCACGGTATTAATCG
CGAAATCCTCAATCTGGTCAGAGCGTCAAAAATCTGCCACAGGGATAAATCCTATGAGGGCGATGAAAAATCAGCGTCCG
CAGCGTCCGCAGCGTCTGGTTTTCATGACTATTACCCTGATGAGCCGGAAAGCTCGACCGGAGACGTTTACCTCGAATTT
CTGGAAACCCTTGGGCGGGACGTTGATCTTCGGGTCATCGTCGACGTCATAGCGGGAGCCTCTGCGGGGGGCATCAACGG
CGTGGCCCTGGCCACGGCGCTGGCCCATGACCTGAGTCTGGCGCCTGTCACGGACATGTGGCTGACCGACGCCGACATGC
TCAATCTGCTGGCGCCCGAGGCCAGGGCGCGACTCTGGAGCAAGTGGTATTTTTGGCCGCTCATGCGCCCCTTGCTGACC
CGGCTCGACCGCGAGGGCTTGCTACATGGGAAGGCCGACGCTGAAATGAAGGAGCGGGTCTCGGTTTTTCTGCGCTCTCG
CTGGTTCAAGCCTCCGCTTGACGGTCGCCGCATGACCGCGCTGATGCTGGATGGCCTGGTGGCGATGGGGAAAACCGGCT
CGGCTTCGGAGTCGCTGTTGCCCACGGGGGCAAGGCTTGACCTTCTGGTCACCGTGACCGATTTCAGAGGGCTGGACCGG
CCCATCTTTATTCATGATCCGCCGGTTGCGCATGAAAGGGAGCATCGCCACGTTCTTCGCTTCAGCCTGGAGCATCGCAG
AACCGGCCATCTGCAGAGCGACTTTGATGTTGATAATCTCCCGTCTCTTGCCTTTGCAGCCCGGGCATCGGCCTCGTACC
CCGGGGCCTTTCCGCCAGCGCAGATCCGTGAGATCGACGACATTCTGGCCGAACGCCACAGGCCGTGGCCGGCGCGCACG
CACTTCCTGGATCGCAATTTCCGGCGCTACCGTGAGCTGGGAGAAAATCCCGAAGACGCGGTACTGGTCGATGGCAGCGT
TCTCGACAACAAGCCCATCATGGCCTGTGTGGAGGCCATCCGCACCCATGGCGCTTTCCGTGAAGTGGATCGCCGCCTCG
TCTTCATAGACCCTCACCTCAGGCGCGAGAAAGCGGTGTCCGGCAATGGTGTTCCGGGTTTTTTCGCCACGTTGCGCGCG
GCGCTCTCGGATCTGCCTCGCCACGATCCCGTTTACAACGAACTGGCAGTGATCAGCCGGTACAACCGGCAGGCCCGGCG
CCTGAAGGCTGCCATCCTGGACGCGCGCTCCCATGTTGCGAAGATGATCGAGCAAGCGACCGCGGGGGGGCTCAAGGGCG
AATTCACTGTCGATGACTTGCGGCACTGGCGGCTCTCATCCATCAACCTCCTGTCCGGTACAGCGATTGTCTATGACGCC
TGGGTGCGTTCTCTGGTCCTTGAAGGGCTGGACTTCATCGTGCAGATCATTGTCAGCGCCTGTCAGTACGCTGCCGATTC
GCGGGACGCGCGCCGGATCCAGGAGATTGTCGAGGCGTGGGCCAGAAATCAGGGGATCATCGCCGCTTCTTACTCCATGC
CGGAACATGTTCATGAGTATTCCGAGTTGCCGAGCTTCGGAAAAATCATCGGGAATTTTGGCGTCATCTACAAAAAGAGG
CGATTGAATTTTGTTCTGCATGAAATCAATGATCTTTATCAAAATATTTCAGGGGATGACTCCGGTGCGACCGATCCGCA
GTCTCTCGATCTGTTGAAAATAAAAATACAAAAATGCATTGACGAGTTGTCGGTTTATGACGACATGAATTTTTTGAGTC
GCCAGGCCGTCTCCATGTGCCGAAGGCTGTTCGTCGGCCGGTTTGCCCATGAAAAATTGAACATTGTTTCTGGCGCAGTT
GATTTTCTTGGCAAGGAAGACCTTGATGAAATCTCAAAGCTGGTTGAAAGGCTGGGCCAGGAGTGCGACATGGAGCGGAC
AATGGACAATACGGATGCCGTGCTGGCATCCCCCTTGCTCCTGCGTATGGCTGAGCGGTGCCGTGTTGCCATACTCACCG
GCTATCTCGGCTACCTTTACTGGGACATCATCCTGCGCCCAACGGCCAGTGCCCTGTCATTGGACGCAGGTCCGATCGAC
GAAATTCTGATCGACCGCATCAGCCCCGAAGATGCGACCACCCTCGCGCTCCCTGATCAGAAGAGTGTTCTGCAAGGCGG
GTCATTCGCCGGCTTTGGCGGTTTTCTCAGCCGGTCGATCCGTGAAAATGACTATTTGTGGGGCCGGCTCCATGCGGTGG
ACCGGCTCTTCGATATTCTGGAGAGCACGGTTCCGGCGAACAGACGCGGCGATTTCGATATCGCCGCCCTGAAAAAACGT
GCGTTCGGAAAGGTGCTTGAGGAGGAGGCCAAGCGGCTCAGGTTCGTCCCGGAGCTGCTGGCCCAACTCGGGGAGGCCGT
CGCACGCCTTTGA

Upstream 100 bases:

>100_bases
TTTTACCGGCTGTTGCTTTTTTGGTCGCAGGGGGGCAGACTGATACGCGACGTAACGATTTCGCCACCCATTGCCAAGGG
GGCTGAAAGCGAGCGCAGCG

Downstream 100 bases:

>100_bases
CCCGGTCCCGATCCGTGGGCGCCATCGCCACCGCTTGTCGACCGTCCCCGTCCCCGTCCCGTCTGCTGGCGCCGGGGTGA
CGTGAGGCGGGGACAGGGTT

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Patatin-Like Protein

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF
LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT
RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR
PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART
HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA
ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA
WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR
RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV
DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID
EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR
AFGKVLEEEAKRLRFVPELLAQLGEAVARL

Sequences:

>Translated_830_residues
MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF
LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT
RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR
PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART
HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA
ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA
WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR
RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV
DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID
EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR
AFGKVLEEEAKRLRFVPELLAQLGEAVARL
>Mature_830_residues
MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF
LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT
RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR
PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART
HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA
ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA
WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR
RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV
DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID
EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR
AFGKVLEEEAKRLRFVPELLAQLGEAVARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93061; Mature: 93061

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASG
CCCCCEEEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
FHDYYPDEPESSTGDVYLEFLETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
APVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLTRLDREGLLHGKADAEMKERV
CCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHH
SVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPA
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH
QIREIDDILAERHRPWPARTHFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHH
RTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRAALSDLPRHDPVYNELAVISR
HHCCHHHHHCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHH
WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEY
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
SELPSFGKIIGNFGVIYKKRRLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAVDFLGKEDLDEISKLVERLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID
HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH
EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDIL
HHHHHCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESTVPANRRGDFDIAALKKRAFGKVLEEEAKRLRFVPELLAQLGEAVARL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASG
CCCCCEEEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
FHDYYPDEPESSTGDVYLEFLETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
APVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLTRLDREGLLHGKADAEMKERV
CCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHH
SVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPA
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH
QIREIDDILAERHRPWPARTHFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHH
RTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRAALSDLPRHDPVYNELAVISR
HHCCHHHHHCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHH
WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEY
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
SELPSFGKIIGNFGVIYKKRRLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAVDFLGKEDLDEISKLVERLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID
HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH
EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDIL
HHHHHCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESTVPANRRGDFDIAALKKRAFGKVLEEEAKRLRFVPELLAQLGEAVARL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA