Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787954

Identifier: 91787954

GI number: 91787954

Start: 2165434

End: 2166015

Strand: Direct

Name: 91787954

Synonym: Bpro_2081

Alternate gene names: NA

Gene position: 2165434-2166015 (Clockwise)

Preceding gene: 91787953

Following gene: 91787957

Centisome position: 41.64

GC content: 66.15

Gene sequence:

>582_bases
ATGCCACTGCCTGCACCCCAAGCCCGATCCCACCTGCACACACGCGCCGTCGTCTTTCGCGGCTACCACCGCGAGGACGG
CCTGTGGGACATTGAGGCCGAGTTGACCGACACCAAGACATATGCGCTGGAGCGCTTCGAGCAGGGCGAGCTGGCGCCGG
GCACGCCTCTTCACGGCATGGCGATTCGGGCGACGGTGGACGACACCCTGACGATCCGCGAGATCGCCAGTTCGATGGAC
CACACGCCTTTTGGCGAATGCCAGCAGGGCAAGGACCCGATGCAGCAGATGGTGGGCGTGACCATGGGGCCGGGCTGGCG
CCAGGCCATTGAGCGGGCGCTGGGCGGCATCAAGGGTTGCACGCACCTGCGCGAGTTGCTGTTCAACATGGCGACGGCTG
CCTACCAGACCATTCCCGCTTACCGTGACCGCCTGCGCAGGCAAGCCGGCCTGCCCGAGCCTGAAAACGCCGGACCGCCT
TACCACCTGGGCAAATGCATCGCCTGGGATTTCGACGGACCGGTGGTGCAGCGGCACTACCCCAAATTTGCGGGTTGGCA
GCCGCTGAAGCGGCAGGGCTGA

Upstream 100 bases:

>100_bases
CAGCATCGCTGATCAGTTACAACCGGAATGATGGTCAACGATTTCCAGCGCCCGCAACTTGCTGGGAAAATGGTTCATCT
GCCCTGAATCAATACCCCCC

Downstream 100 bases:

>100_bases
GTAAGAAGGGGGGGCCGCCGGCCCGGGTCTTGTTGAAGTCGCCGTGCCGGCCGCGCCTTGATTGATGCGCGGGTTCATCG
GCACGCGCCCCGGCGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MPLPAPQARSHLHTRAVVFRGYHREDGLWDIEAELTDTKTYALERFEQGELAPGTPLHGMAIRATVDDTLTIREIASSMD
HTPFGECQQGKDPMQQMVGVTMGPGWRQAIERALGGIKGCTHLRELLFNMATAAYQTIPAYRDRLRRQAGLPEPENAGPP
YHLGKCIAWDFDGPVVQRHYPKFAGWQPLKRQG

Sequences:

>Translated_193_residues
MPLPAPQARSHLHTRAVVFRGYHREDGLWDIEAELTDTKTYALERFEQGELAPGTPLHGMAIRATVDDTLTIREIASSMD
HTPFGECQQGKDPMQQMVGVTMGPGWRQAIERALGGIKGCTHLRELLFNMATAAYQTIPAYRDRLRRQAGLPEPENAGPP
YHLGKCIAWDFDGPVVQRHYPKFAGWQPLKRQG
>Mature_192_residues
PLPAPQARSHLHTRAVVFRGYHREDGLWDIEAELTDTKTYALERFEQGELAPGTPLHGMAIRATVDDTLTIREIASSMDH
TPFGECQQGKDPMQQMVGVTMGPGWRQAIERALGGIKGCTHLRELLFNMATAAYQTIPAYRDRLRRQAGLPEPENAGPPY
HLGKCIAWDFDGPVVQRHYPKFAGWQPLKRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21658; Mature: 21527

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPAPQARSHLHTRAVVFRGYHREDGLWDIEAELTDTKTYALERFEQGELAPGTPLHGM
CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCE
AIRATVDDTLTIREIASSMDHTPFGECQQGKDPMQQMVGVTMGPGWRQAIERALGGIKGC
EEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
THLRELLFNMATAAYQTIPAYRDRLRRQAGLPEPENAGPPYHLGKCIAWDFDGPVVQRHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCC
PKFAGWQPLKRQG
CCCCCCCCCCCCC
>Mature Secondary Structure 
PLPAPQARSHLHTRAVVFRGYHREDGLWDIEAELTDTKTYALERFEQGELAPGTPLHGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCE
AIRATVDDTLTIREIASSMDHTPFGECQQGKDPMQQMVGVTMGPGWRQAIERALGGIKGC
EEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
THLRELLFNMATAAYQTIPAYRDRLRRQAGLPEPENAGPPYHLGKCIAWDFDGPVVQRHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCC
PKFAGWQPLKRQG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA