| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787942
Identifier: 91787942
GI number: 91787942
Start: 2147205
End: 2147630
Strand: Reverse
Name: 91787942
Synonym: Bpro_2066
Alternate gene names: NA
Gene position: 2147630-2147205 (Counterclockwise)
Preceding gene: 91787943
Following gene: 91787941
Centisome position: 41.3
GC content: 64.08
Gene sequence:
>426_bases ATGCCAAAACCCAGCAGAACCTCCCAGATTGCAACGCCCAAGCCGGTCGACGAAAAGATCACGATCAACTTGGGCTGTGT CGACCTTGGCCAGATTGACTTGCTGGTGCAGGAAGGCCTTTATGCGAACCGGACCGACCTGATCCGCACGGCGATCCGAA ACCAGCTCACCACGCACAGCGAGGTAGTGCGCCAGGTCGTGTCGCGCAAGACGCTGGTGCTGGGCATCCAGCACTACACC GAGGCGGACCTGCTGGCCGTGCAGGCGGCCGGGGAGAAGTTGCAGATTCGCGTGCTGGGGCTGGCCACGATCGCACCCGA AGTTACGCCCGCGCTGGCGCTCGCCACCATTGAGTCGCTGACCGTGCTGGGCGCCCTGCATGCGAGCCCCGCCGTGAAAG CCGCGCTCGTGCAGCGTATCCGCTAA
Upstream 100 bases:
>100_bases AAGCAGAAGGCTTTGACTTAACCGAGGATTGCCCGCGCAACCCGGACGCCTCGATTTACCATCCAAATAACATCCACTTG GATGGTGCTAAGATGGTCAA
Downstream 100 bases:
>100_bases TACAGCGAATACAGCGAGTCAACGAATCAACGAATCGAACTGAAAGAAGCTGATGACCCCTGATTTCCAACGCCTGATGA AGGATGCCGCCCAGCTCACC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator CopG Family; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator CopG/Arc/MetJ Family; CopG/Arc/MetJ Family Transcriptional Regulator; CopG/Arc/MetJ Family Transcriptional Regulator
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPKPSRTSQIATPKPVDEKITINLGCVDLGQIDLLVQEGLYANRTDLIRTAIRNQLTTHSEVVRQVVSRKTLVLGIQHYT EADLLAVQAAGEKLQIRVLGLATIAPEVTPALALATIESLTVLGALHASPAVKAALVQRIR
Sequences:
>Translated_141_residues MPKPSRTSQIATPKPVDEKITINLGCVDLGQIDLLVQEGLYANRTDLIRTAIRNQLTTHSEVVRQVVSRKTLVLGIQHYT EADLLAVQAAGEKLQIRVLGLATIAPEVTPALALATIESLTVLGALHASPAVKAALVQRIR >Mature_140_residues PKPSRTSQIATPKPVDEKITINLGCVDLGQIDLLVQEGLYANRTDLIRTAIRNQLTTHSEVVRQVVSRKTLVLGIQHYTE ADLLAVQAAGEKLQIRVLGLATIAPEVTPALALATIESLTVLGALHASPAVKAALVQRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15160; Mature: 15029
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPSRTSQIATPKPVDEKITINLGCVDLGQIDLLVQEGLYANRTDLIRTAIRNQLTTHS CCCCCCCCCCCCCCCCCCEEEEEECEECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH EVVRQVVSRKTLVLGIQHYTEADLLAVQAAGEKLQIRVLGLATIAPEVTPALALATIESL HHHHHHHCCHHEEEEHHHCCCHHHEEEECCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHH TVLGALHASPAVKAALVQRIR HHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure PKPSRTSQIATPKPVDEKITINLGCVDLGQIDLLVQEGLYANRTDLIRTAIRNQLTTHS CCCCCCCCCCCCCCCCCEEEEEECEECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH EVVRQVVSRKTLVLGIQHYTEADLLAVQAAGEKLQIRVLGLATIAPEVTPALALATIESL HHHHHHHCCHHEEEEHHHCCCHHHEEEECCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHH TVLGALHASPAVKAALVQRIR HHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA