| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is chqB [H]
Identifier: 91787940
GI number: 91787940
Start: 2145229
End: 2146068
Strand: Direct
Name: chqB [H]
Synonym: Bpro_2064
Alternate gene names: 91787940
Gene position: 2145229-2146068 (Clockwise)
Preceding gene: 91787939
Following gene: 91787944
Centisome position: 41.25
GC content: 62.26
Gene sequence:
>840_bases ATGCGTAACCTCCACCAAGACAACATCACCCAGGCCGTCATCGCACGCCTGGCGAATACGCCCGACCCCCGCCTCAAGGA AATCATGACGGCGCTGGTGCAGCACCTGCACGCCTTCGCCCGTGAGGTCAAGCTGACCGAGGCCGAGTGGTTGAAGGGCA TCGAATTCCTCACCGCCACCGGCCACAAATGCAACGAAACGCGCCAGGAGTTCATCCTGCTGAGCGACGTGCTGGGCTTG TCGATGCTCACGGTTGCGATGAACAACGACAAGCCCCAGGGCTGCACCGAGGCCACGGTGTTCGGCCCGTTCTACGTCGA AGGCGCGCCGCACTACGAGAACGGCGACGACCTAGCCAACGGCGCCAGCGGCGAACCCTGCCAGGTGCGCGGCATTGTGC GTGGCCTGAACGGTGAACCCGTGGCCAACGCGGCCATCGAGGTCTGGCAGGCCGACGACGAGGGGCATTACGACGTGCAG AAACCTGAACTCAACCATGCGCAGGCACGCGGCGTGCTGAGATCACGTGCCGATGGCAGCTTTGACTTCAGGACCATCGT GGCCGAAGCCTATCCGATCCCGACGGATGGCCCGGTGGGCGACATGCTCAAGGCTACGAAGCGCCACCCATGGCGGCCCG CGCATTTGCATTTCATGATTACGGCCGAAGGCTACGAAACATTGATCACCCATGTCTTCCGTGACGGCGACCCATACCTC GATTCCGATGCTGTGTTCGGCGTGCGCCAGTCGCTGGTGGCAGATTGGGTGAGGCAACCCGATGGCGACTATCTGCTGGA ATATGATTTTGTGCTGAACCCGGTGCGCTCGGGCCGTTAA
Upstream 100 bases:
>100_bases GGAGCGCGCAGCGCTGCGGCAACTGCTGCAGGATGCGTTCGATGGTGCGCGACCGGCCTGATTCACCGAAATTGCTATCC TCAACGATCAACGAAACCCC
Downstream 100 bases:
>100_bases TGAGTTAGTGGGCCTGCCGGTGCGGATGCTCCAGAAAAAACCGCACCATCTCGGCGCTGGCATCTGGCCCCCGGGCGTCG GTGTACGAGCCGTTGGCGCT
Product: catechol 1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-HQD [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRNLHQDNITQAVIARLANTPDPRLKEIMTALVQHLHAFAREVKLTEAEWLKGIEFLTATGHKCNETRQEFILLSDVLGL SMLTVAMNNDKPQGCTEATVFGPFYVEGAPHYENGDDLANGASGEPCQVRGIVRGLNGEPVANAAIEVWQADDEGHYDVQ KPELNHAQARGVLRSRADGSFDFRTIVAEAYPIPTDGPVGDMLKATKRHPWRPAHLHFMITAEGYETLITHVFRDGDPYL DSDAVFGVRQSLVADWVRQPDGDYLLEYDFVLNPVRSGR
Sequences:
>Translated_279_residues MRNLHQDNITQAVIARLANTPDPRLKEIMTALVQHLHAFAREVKLTEAEWLKGIEFLTATGHKCNETRQEFILLSDVLGL SMLTVAMNNDKPQGCTEATVFGPFYVEGAPHYENGDDLANGASGEPCQVRGIVRGLNGEPVANAAIEVWQADDEGHYDVQ KPELNHAQARGVLRSRADGSFDFRTIVAEAYPIPTDGPVGDMLKATKRHPWRPAHLHFMITAEGYETLITHVFRDGDPYL DSDAVFGVRQSLVADWVRQPDGDYLLEYDFVLNPVRSGR >Mature_279_residues MRNLHQDNITQAVIARLANTPDPRLKEIMTALVQHLHAFAREVKLTEAEWLKGIEFLTATGHKCNETRQEFILLSDVLGL SMLTVAMNNDKPQGCTEATVFGPFYVEGAPHYENGDDLANGASGEPCQVRGIVRGLNGEPVANAAIEVWQADDEGHYDVQ KPELNHAQARGVLRSRADGSFDFRTIVAEAYPIPTDGPVGDMLKATKRHPWRPAHLHFMITAEGYETLITHVFRDGDPYL DSDAVFGVRQSLVADWVRQPDGDYLLEYDFVLNPVRSGR
Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.37 [H]
Molecular weight: Translated: 31075; Mature: 31075
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLHQDNITQAVIARLANTPDPRLKEIMTALVQHLHAFAREVKLTEAEWLKGIEFLTAT CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC GHKCNETRQEFILLSDVLGLSMLTVAMNNDKPQGCTEATVFGPFYVEGAPHYENGDDLAN CCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEECCEEECCCCCCCCCCCCCC GASGEPCQVRGIVRGLNGEPVANAAIEVWQADDEGHYDVQKPELNHAQARGVLRSRADGS CCCCCCEEEHHHHHCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC FDFRTIVAEAYPIPTDGPVGDMLKATKRHPWRPAHLHFMITAEGYETLITHVFRDGDPYL CHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC DSDAVFGVRQSLVADWVRQPDGDYLLEYDFVLNPVRSGR CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHEECCCCCCC >Mature Secondary Structure MRNLHQDNITQAVIARLANTPDPRLKEIMTALVQHLHAFAREVKLTEAEWLKGIEFLTAT CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC GHKCNETRQEFILLSDVLGLSMLTVAMNNDKPQGCTEATVFGPFYVEGAPHYENGDDLAN CCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEECCEEECCCCCCCCCCCCCC GASGEPCQVRGIVRGLNGEPVANAAIEVWQADDEGHYDVQKPELNHAQARGVLRSRADGS CCCCCCEEEHHHHHCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC FDFRTIVAEAYPIPTDGPVGDMLKATKRHPWRPAHLHFMITAEGYETLITHVFRDGDPYL CHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC DSDAVFGVRQSLVADWVRQPDGDYLLEYDFVLNPVRSGR CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141483 [H]