Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tftE [H]

Identifier: 91787939

GI number: 91787939

Start: 2144131

End: 2145189

Strand: Direct

Name: tftE [H]

Synonym: Bpro_2063

Alternate gene names: 91787939

Gene position: 2144131-2145189 (Clockwise)

Preceding gene: 91787938

Following gene: 91787940

Centisome position: 41.23

GC content: 67.23

Gene sequence:

>1059_bases
ATGCAGGTTTTCGCCTACACCTCCAACCCGGCCCGTGTGGTTTTCGGCGCGGGCAGCCTTCAATACCTGGGGCGGGAGAT
CGACGCCCTGGGCGCCCGCAAGGTGCTGGTGCTGTGCACCCCCGGGCAACGCCCGCTGGCTGAACGTGTGGCAGCCCTGT
TGGCTGAGCGTTGCGCCGGCGTGTTTGACGGCGCCGCGATGCACGTACCGATTGAGACCGCCAGGCAGGCGCGAGAGGTA
GCGAGCCGGCTCGGCGCCGATTGCGCGGTCGCCGTGGGGGGCGGCTCCACCATCGGCCTGGGCAAGGCCATTGCGCTGGA
TTCAGGTCTGCCGATCCTGGCCATTCCCACCACCTACGCCGGCTCGGAGATGACGCCGATCTATGGCATCACCGAGGCCG
GACTCAAGAAGACCGGCAAGGACGCCCGCGTGCTGCCGCGCACCGTGCTCTACGACCCCGAACTCACGACCAGCCTGCCC
GTGGCGGTCAGCGTGACCAGTGGCCTCAATGCCATCGCGCACGCGGCCGAGGGGCTGTATGCCGTGGATGCGAATCCGAT
CATGAGTCTGATGGCCGAGGAGGGCATTGCCGCCATCGGGCGATCACTTCCTGCTATCAAAAGGAAACCGGACGATCTGC
AAGCGCGCAGCGACGCGCTATACGGCGCCTGGCTGTGCGGCACGGTGCTCGGCCACGTCGGCATGGCGCTGCATCACAAG
CTGTGCCACACGCTGGGCGGCAGCTTCAACCTGCCCCATGCCGAGACACACACCATCGTGCTGCCGCACGCGCTTGCCTA
CAACGCCAAGGCGGCGCCGGTGGCCATGCAGCGGATTGCCCGGGCCCTGAAGGCAGATTCGGCGCCGCATGCGGTGTTTG
ATCTGGCCAGAGACAATGGCGCGCCGGTGGCCCTGAAGGACATCGGCATGCAGCTGGCAGACCTGGATCGGGCCTGCGAC
ATTGCCTTGCAAAACCAGTATCCGAACCCCCGCCCGCTGGAGCGCGCAGCGCTGCGGCAACTGCTGCAGGATGCGTTCGA
TGGTGCGCGACCGGCCTGA

Upstream 100 bases:

>100_bases
TGCTGAGCCTTGGAAAGTACATGTATCCACAGAAGGAATCGCTCAACAACGGTCCGTCCGGCTTGTCGGTTGCCCCTCAG
GGATAAAGTCAGGGATAAAA

Downstream 100 bases:

>100_bases
TTCACCGAAATTGCTATCCTCAACGATCAACGAAACCCCATGCGTAACCTCCACCAAGACAACATCACCCAGGCCGTCAT
CGCACGCCTGGCGAATACGC

Product: iron-containing alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV
ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP
VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK
LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD
IALQNQYPNPRPLERAALRQLLQDAFDGARPA

Sequences:

>Translated_352_residues
MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV
ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP
VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK
LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD
IALQNQYPNPRPLERAALRQLLQDAFDGARPA
>Mature_352_residues
MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV
ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP
VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK
LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD
IALQNQYPNPRPLERAALRQLLQDAFDGARPA

Specific function: Fucose metabolism; fourth step. [C]

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789163, Length=373, Percent_Identity=27.8820375335121, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI87082107, Length=286, Percent_Identity=30.4195804195804, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI48994951, Length=359, Percent_Identity=25.0696378830084, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787493, Length=410, Percent_Identity=22.1951219512195, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17537053, Length=414, Percent_Identity=23.6714975845411, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321181, Length=373, Percent_Identity=27.0777479892761, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.3.1.32 [H]

Molecular weight: Translated: 36836; Mature: 36836

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAG
CEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VFDGAAMHVPIETARQAREVASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYA
HHCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCCCC
GSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLPVAVSVTSGLNAIAHAAEGLY
CCCCCCEECCHHHHHHHCCCCCHHCCHHEEECCCCCCCCCEEEEECHHHHHHHHHHCCEE
AVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK
EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNG
HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
APVALKDIGMQLADLDRACDIALQNQYPNPRPLERAALRQLLQDAFDGARPA
CCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAG
CEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VFDGAAMHVPIETARQAREVASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYA
HHCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCCCC
GSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLPVAVSVTSGLNAIAHAAEGLY
CCCCCCEECCHHHHHHHCCCCCHHCCHHEEECCCCCCCCCEEEEECHHHHHHHHHHCCEE
AVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK
EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNG
HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
APVALKDIGMQLADLDRACDIALQNQYPNPRPLERAALRQLLQDAFDGARPA
CCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7538273 [H]