| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is tftE [H]
Identifier: 91787939
GI number: 91787939
Start: 2144131
End: 2145189
Strand: Direct
Name: tftE [H]
Synonym: Bpro_2063
Alternate gene names: 91787939
Gene position: 2144131-2145189 (Clockwise)
Preceding gene: 91787938
Following gene: 91787940
Centisome position: 41.23
GC content: 67.23
Gene sequence:
>1059_bases ATGCAGGTTTTCGCCTACACCTCCAACCCGGCCCGTGTGGTTTTCGGCGCGGGCAGCCTTCAATACCTGGGGCGGGAGAT CGACGCCCTGGGCGCCCGCAAGGTGCTGGTGCTGTGCACCCCCGGGCAACGCCCGCTGGCTGAACGTGTGGCAGCCCTGT TGGCTGAGCGTTGCGCCGGCGTGTTTGACGGCGCCGCGATGCACGTACCGATTGAGACCGCCAGGCAGGCGCGAGAGGTA GCGAGCCGGCTCGGCGCCGATTGCGCGGTCGCCGTGGGGGGCGGCTCCACCATCGGCCTGGGCAAGGCCATTGCGCTGGA TTCAGGTCTGCCGATCCTGGCCATTCCCACCACCTACGCCGGCTCGGAGATGACGCCGATCTATGGCATCACCGAGGCCG GACTCAAGAAGACCGGCAAGGACGCCCGCGTGCTGCCGCGCACCGTGCTCTACGACCCCGAACTCACGACCAGCCTGCCC GTGGCGGTCAGCGTGACCAGTGGCCTCAATGCCATCGCGCACGCGGCCGAGGGGCTGTATGCCGTGGATGCGAATCCGAT CATGAGTCTGATGGCCGAGGAGGGCATTGCCGCCATCGGGCGATCACTTCCTGCTATCAAAAGGAAACCGGACGATCTGC AAGCGCGCAGCGACGCGCTATACGGCGCCTGGCTGTGCGGCACGGTGCTCGGCCACGTCGGCATGGCGCTGCATCACAAG CTGTGCCACACGCTGGGCGGCAGCTTCAACCTGCCCCATGCCGAGACACACACCATCGTGCTGCCGCACGCGCTTGCCTA CAACGCCAAGGCGGCGCCGGTGGCCATGCAGCGGATTGCCCGGGCCCTGAAGGCAGATTCGGCGCCGCATGCGGTGTTTG ATCTGGCCAGAGACAATGGCGCGCCGGTGGCCCTGAAGGACATCGGCATGCAGCTGGCAGACCTGGATCGGGCCTGCGAC ATTGCCTTGCAAAACCAGTATCCGAACCCCCGCCCGCTGGAGCGCGCAGCGCTGCGGCAACTGCTGCAGGATGCGTTCGA TGGTGCGCGACCGGCCTGA
Upstream 100 bases:
>100_bases TGCTGAGCCTTGGAAAGTACATGTATCCACAGAAGGAATCGCTCAACAACGGTCCGTCCGGCTTGTCGGTTGCCCCTCAG GGATAAAGTCAGGGATAAAA
Downstream 100 bases:
>100_bases TTCACCGAAATTGCTATCCTCAACGATCAACGAAACCCCATGCGTAACCTCCACCAAGACAACATCACCCAGGCCGTCAT CGCACGCCTGGCGAATACGC
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD IALQNQYPNPRPLERAALRQLLQDAFDGARPA
Sequences:
>Translated_352_residues MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD IALQNQYPNPRPLERAALRQLLQDAFDGARPA >Mature_352_residues MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAGVFDGAAMHVPIETARQAREV ASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYAGSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLP VAVSVTSGLNAIAHAAEGLYAVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNGAPVALKDIGMQLADLDRACD IALQNQYPNPRPLERAALRQLLQDAFDGARPA
Specific function: Fucose metabolism; fourth step. [C]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789163, Length=373, Percent_Identity=27.8820375335121, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI87082107, Length=286, Percent_Identity=30.4195804195804, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI48994951, Length=359, Percent_Identity=25.0696378830084, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787493, Length=410, Percent_Identity=22.1951219512195, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17537053, Length=414, Percent_Identity=23.6714975845411, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321181, Length=373, Percent_Identity=27.0777479892761, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.3.1.32 [H]
Molecular weight: Translated: 36836; Mature: 36836
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAG CEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VFDGAAMHVPIETARQAREVASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYA HHCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCCCC GSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLPVAVSVTSGLNAIAHAAEGLY CCCCCCEECCHHHHHHHCCCCCHHCCHHEEECCCCCCCCCEEEEECHHHHHHHHHHCCEE AVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNG HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC APVALKDIGMQLADLDRACDIALQNQYPNPRPLERAALRQLLQDAFDGARPA CCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQVFAYTSNPARVVFGAGSLQYLGREIDALGARKVLVLCTPGQRPLAERVAALLAERCAG CEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VFDGAAMHVPIETARQAREVASRLGADCAVAVGGGSTIGLGKAIALDSGLPILAIPTTYA HHCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCCCC GSEMTPIYGITEAGLKKTGKDARVLPRTVLYDPELTTSLPVAVSVTSGLNAIAHAAEGLY CCCCCCEECCHHHHHHHCCCCCHHCCHHEEECCCCCCCCCEEEEECHHHHHHHHHHCCEE AVDANPIMSLMAEEGIAAIGRSLPAIKRKPDDLQARSDALYGAWLCGTVLGHVGMALHHK EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHTLGGSFNLPHAETHTIVLPHALAYNAKAAPVAMQRIARALKADSAPHAVFDLARDNG HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC APVALKDIGMQLADLDRACDIALQNQYPNPRPLERAALRQLLQDAFDGARPA CCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7538273 [H]