| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787932
Identifier: 91787932
GI number: 91787932
Start: 2137328
End: 2138029
Strand: Reverse
Name: 91787932
Synonym: Bpro_2056
Alternate gene names: NA
Gene position: 2138029-2137328 (Counterclockwise)
Preceding gene: 91787933
Following gene: 91787931
Centisome position: 41.11
GC content: 67.24
Gene sequence:
>702_bases ATGAGCCTCATGTTGCGCGTGCTGACCCTATGCGTCGCCCTGGCCACCTTGGCCGCCCCGGGCACGATGATGGCTGCGCA GCCGCTGCCTGTGGCCGGATCGCCTACTCCACCTACTCCACCCACTACTACGCGGCTGCAGGCGCGCAAGGCGATCGAGC ACCCCGAGCCCGCCGTCCGGCGCGCTGCCGTCGTGCGCCTGGGCGAAGTCGGCGTCATGGCCGATGCCGACCGGCTGGTT GCCCACCTGGGAGACGATGACGCGCCGGTGCGCGAACTCGCCGAAGCCGCGCTGTGGCAGATCTGGAGCCGCTCGGGCGA CCGCGCGATCGATGCCCTGCTCCTGCGCGGCGTCCAGCAGATGGAAGCGCACCAACTGGTCGAGGCGGTGGCCACGTTTT CCGAGGTCATTCGCAGAAAGCCGGCTTTCGCGGAGGGCTGGAACAAGCGCGCCACTGTTTATTACCTGCTCGGCCAGTAC GAGCTGTCAATCAAAGACTGCGACGAAGTCATGAAACGCAACCGCCACCACTTCGGGGCGCTCGCGGGTTACGGGCAGAT GTACCTTGCTCTGGGTGACCCCGACCGCGCCCAGCCCTACCTGGAGCGCGCGCTCAAGGTGAACCCGAACATGGCGGGTG TGGCGGCGACGATCCAGCTGATCGAGCAGCGCCGCGAAGCAAAGCGGCGCCGAACAATCTGA
Upstream 100 bases:
>100_bases GTGGCCGTGCTGGAGCAGCTGGCGGCGGCCGTGCGCCAGCGCCGGGCGGGCGCCATCAGGTAATTTGCCGGCGTGCCTCC CGGCGTATAGGATGAGCAGC
Downstream 100 bases:
>100_bases ATCCAGACCTCTAACCTCTAGTGTGGTGTTGGCACCCGCCCATCCATTGTTGGCATGCACCCTAAAATGGTCCGCTAACC GCAATACCATTCAGTTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; 2-Hydroxy-6-Oxo-2 4-Heptadienoate Hydrolase; TPR Protein; TPR Domain-Containing Protein; TPR Repeat Protein; TPR-Domain Containing Protein; TPR Repeat Domain-Containing Protein; Tetratricopeptide TPR2 Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSLMLRVLTLCVALATLAAPGTMMAAQPLPVAGSPTPPTPPTTTRLQARKAIEHPEPAVRRAAVVRLGEVGVMADADRLV AHLGDDDAPVRELAEAALWQIWSRSGDRAIDALLLRGVQQMEAHQLVEAVATFSEVIRRKPAFAEGWNKRATVYYLLGQY ELSIKDCDEVMKRNRHHFGALAGYGQMYLALGDPDRAQPYLERALKVNPNMAGVAATIQLIEQRREAKRRRTI
Sequences:
>Translated_233_residues MSLMLRVLTLCVALATLAAPGTMMAAQPLPVAGSPTPPTPPTTTRLQARKAIEHPEPAVRRAAVVRLGEVGVMADADRLV AHLGDDDAPVRELAEAALWQIWSRSGDRAIDALLLRGVQQMEAHQLVEAVATFSEVIRRKPAFAEGWNKRATVYYLLGQY ELSIKDCDEVMKRNRHHFGALAGYGQMYLALGDPDRAQPYLERALKVNPNMAGVAATIQLIEQRREAKRRRTI >Mature_232_residues SLMLRVLTLCVALATLAAPGTMMAAQPLPVAGSPTPPTPPTTTRLQARKAIEHPEPAVRRAAVVRLGEVGVMADADRLVA HLGDDDAPVRELAEAALWQIWSRSGDRAIDALLLRGVQQMEAHQLVEAVATFSEVIRRKPAFAEGWNKRATVYYLLGQYE LSIKDCDEVMKRNRHHFGALAGYGQMYLALGDPDRAQPYLERALKVNPNMAGVAATIQLIEQRREAKRRRTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25681; Mature: 25550
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMLRVLTLCVALATLAAPGTMMAAQPLPVAGSPTPPTPPTTTRLQARKAIEHPEPAVR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH RAAVVRLGEVGVMADADRLVAHLGDDDAPVRELAEAALWQIWSRSGDRAIDALLLRGVQQ HHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MEAHQLVEAVATFSEVIRRKPAFAEGWNKRATVYYLLGQYELSIKDCDEVMKRNRHHFGA HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCEEECHHHHHHHHHCCCHHHHH LAGYGQMYLALGDPDRAQPYLERALKVNPNMAGVAATIQLIEQRREAKRRRTI HHCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLMLRVLTLCVALATLAAPGTMMAAQPLPVAGSPTPPTPPTTTRLQARKAIEHPEPAVR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH RAAVVRLGEVGVMADADRLVAHLGDDDAPVRELAEAALWQIWSRSGDRAIDALLLRGVQQ HHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MEAHQLVEAVATFSEVIRRKPAFAEGWNKRATVYYLLGQYELSIKDCDEVMKRNRHHFGA HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCEEECHHHHHHHHHCCCHHHHH LAGYGQMYLALGDPDRAQPYLERALKVNPNMAGVAATIQLIEQRREAKRRRTI HHCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA