| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gloB
Identifier: 91787931
GI number: 91787931
Start: 2136254
End: 2137045
Strand: Reverse
Name: gloB
Synonym: Bpro_2055
Alternate gene names: 91787931
Gene position: 2137045-2136254 (Counterclockwise)
Preceding gene: 91787932
Following gene: 91787930
Centisome position: 41.09
GC content: 65.4
Gene sequence:
>792_bases ATGATCGTCGAACGCATCTGGACCGGTAATGCCTACCGCAATTTCAATTACCTGATCGCCTGCCCCGAGACCGGCGAAGC GCTGGCCATCGACCCGCTCGACCATGAAAAGACGCTGGCCACCGCCAGGGTCAAGGGCTGGCAGATCACGCAGGTCCTCA ACACCCACGAGCACCACGACCACACCGGCGGCAACGCGGCCGTGATTGCGGCCACCGGCGCCAAACTGATCGCCCACCAC AAGGCCGGCGGGCGCATTGCGGGTGTGGACCGGGGCGTGAAGGCCGGCGATGTGATCAAGGTCGGCAAGACCGTCGAGCT GGAGTGCCTGGACACGCCCGGCCACACGATGTGCCACATCTGCCTGCGCTCGCACACCGAGCAGCCGGCGCTGTTTTCGG GAGACACGCTGTTCAATGCGGGCGCCGGCAATGTGCACAACGGCGGCGACGTCAACGCGCTGTATGCCACCTTTGCGGAA CAGCTGGCCCGGCTGCCGGACGACACCCTGGTCTATCCGGGCCACGACTACATCGAGAACAACCTCCGGTTCACCCTGGC GCGCGAACCCGACAACGCCGCCGCAAAAGCCCTGCTGCCCAGCGTGACCGACCATGACCCCGCGAAGTCGGCCGTCACCA CGCTCAAGGACGAAAAAGAGTTCAACACCTTCCTGCGCCTGAGCAGCCCCAGCGTCATCGCCAGGCTGCGCGAGAGCTTT CCCGACCTGCCGGACGAGCCCGACGCCAGAACGGTGTTTGCCAAGCTGCGGGAACTGCGCAACCAGTGGTGA
Upstream 100 bases:
>100_bases TGCCCCGGACTTGATCCGGGGTCCGGGATGACAAACCAGGAGGCAAGGGCTTAACTGACTAGTATTGCCGCTCACCGTTA ACAAGCCCCTGGAGCCCGCT
Downstream 100 bases:
>100_bases GCGGAGAGTGACAGACACGAGCCGCAACATGCAGCAGGACCAGCATCTCAGAGCACGCATCGAGGAGATGCTGCGCGCCT TCACGCTGCAGGCAGCCGAG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIVERIWTGNAYRNFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHDHTGGNAAVIAATGAKLIAHH KAGGRIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHICLRSHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAE QLARLPDDTLVYPGHDYIENNLRFTLAREPDNAAAKALLPSVTDHDPAKSAVTTLKDEKEFNTFLRLSSPSVIARLRESF PDLPDEPDARTVFAKLRELRNQW
Sequences:
>Translated_263_residues MIVERIWTGNAYRNFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHDHTGGNAAVIAATGAKLIAHH KAGGRIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHICLRSHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAE QLARLPDDTLVYPGHDYIENNLRFTLAREPDNAAAKALLPSVTDHDPAKSAVTTLKDEKEFNTFLRLSSPSVIARLRESF PDLPDEPDARTVFAKLRELRNQW >Mature_263_residues MIVERIWTGNAYRNFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHDHTGGNAAVIAATGAKLIAHH KAGGRIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHICLRSHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAE QLARLPDDTLVYPGHDYIENNLRFTLAREPDNAAAKALLPSVTDHDPAKSAVTTLKDEKEFNTFLRLSSPSVIARLRESF PDLPDEPDARTVFAKLRELRNQW
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538320, Length=237, Percent_Identity=35.4430379746835, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI94538322, Length=235, Percent_Identity=35.7446808510638, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI14150041, Length=228, Percent_Identity=33.7719298245614, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI21703352, Length=219, Percent_Identity=31.5068493150685, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI116642887, Length=219, Percent_Identity=31.5068493150685, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI46361987, Length=193, Percent_Identity=34.7150259067358, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI41327741, Length=170, Percent_Identity=31.1764705882353, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1786406, Length=244, Percent_Identity=32.3770491803279, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787158, Length=191, Percent_Identity=31.413612565445, Blast_Score=71, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17536925, Length=263, Percent_Identity=33.4600760456274, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17538952, Length=167, Percent_Identity=31.7365269461078, Blast_Score=78, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320478, Length=267, Percent_Identity=28.4644194756554, Blast_Score=99, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=270, Percent_Identity=25.5555555555556, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356335, Length=229, Percent_Identity=32.3144104803493, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24667703, Length=229, Percent_Identity=32.3144104803493, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24667711, Length=229, Percent_Identity=32.3144104803493, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI221330176, Length=169, Percent_Identity=31.9526627218935, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_POLSJ (Q12BV7)
Other databases:
- EMBL: CP000316 - RefSeq: YP_548883.1 - ProteinModelPortal: Q12BV7 - SMR: Q12BV7 - STRING: Q12BV7 - GeneID: 4015281 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_2055 - NMPDR: fig|296591.1.peg.2550 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: LIACPET - PhylomeDB: Q12BV7 - ProtClustDB: CLSK752984 - BioCyc: PSP296591:BPRO_2055-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28759; Mature: 28759
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVERIWTGNAYRNFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHD CCEEEEECCCCEECCEEEEECCCCCCEEEECCCCCCHHHHHHHCCCEEEEHHHHCCCCCC HTGGNAAVIAATGAKLIAHHKAGGRIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHI CCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCEEEECCEEEEEEECCCCHHHHHH CLRSHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAEQLARLPDDTLVYPGHDYIEN HHHCCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHCC NLRFTLAREPDNAAAKALLPSVTDHDPAKSAVTTLKDEKEFNTFLRLSSPSVIARLRESF CEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHC PDLPDEPDARTVFAKLRELRNQW CCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIVERIWTGNAYRNFNYLIACPETGEALAIDPLDHEKTLATARVKGWQITQVLNTHEHHD CCEEEEECCCCEECCEEEEECCCCCCEEEECCCCCCHHHHHHHCCCEEEEHHHHCCCCCC HTGGNAAVIAATGAKLIAHHKAGGRIAGVDRGVKAGDVIKVGKTVELECLDTPGHTMCHI CCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCEEEECCEEEEEEECCCCHHHHHH CLRSHTEQPALFSGDTLFNAGAGNVHNGGDVNALYATFAEQLARLPDDTLVYPGHDYIEN HHHCCCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHCC NLRFTLAREPDNAAAKALLPSVTDHDPAKSAVTTLKDEKEFNTFLRLSSPSVIARLRESF CEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHC PDLPDEPDARTVFAKLRELRNQW CCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA