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The map label for this gene is pecT [H]

Identifier: 91787919

GI number: 91787919

Start: 2122388

End: 2123293

Strand: Direct

Name: pecT [H]

Synonym: Bpro_2043

Alternate gene names: 91787919

Gene position: 2122388-2123293 (Clockwise)

Preceding gene: 91787913

Following gene: 91787920

Centisome position: 40.81

GC content: 65.01

Gene sequence:

>906_bases
ATGAATACGCTTGATTTGGAGTTGCTCAGGGCCCTGGTGGCCATTGAGGAGCAGGACAGCTTTGCCGGCGCCGCCATTCA
CCTGGGTAAAACGCAGTCGGCGGTGACGCAGCAAATGCAGCGCCTGGAAGACCAGATTGGCCACCCCTTGTTTGAAAAGC
AGGGGCGCCACAAGCGGCTGACGCCGCACGGCCAAAAGCTGCTTGACTACGCGCGGCACTTGCTGGCCATCAATGACGAT
GCCCTGCGCAGCCTGCAGCAGGGCAACCTGGAAGGCGTGCTGCGCATCGGTGCGCCGCACGATGTAGCCGACACCATGCT
GCCGACGCTGCTGGCGCAGGTGGCGCGCGCCTCACCGCTGCTGCGGCTCGACATCCACGTCGGGCGCAGCCCTTTCCTGA
TGGAGTCGCTCAAGCGCGGCGAGATCGATATGACCATCTCCAATCGCAATGACCCGGCGCTTGACGGCGTGGTCCTGCGC
ACCTCGCCCACGGTGTGGCTGTGTTCGGCCAGCTATGTGCATGACCGCGCCAAGCCCGTGCCGCTGATCCTGGTGGATGG
CCCCAGCGTGTTTTACAGACTGGCGCGCGAGGCGCTTGATGCCGCGGGCATCCGGTGGTCGCCCAACTACACCGCGTCGA
GCCTGATCGGCATCAAGGCTGCGCTGCGGGCGGGCCTGGGCGTGACCGCGCGTGGCATCGAGATGGCGGGCGCAGACCTG
CGCGTACTGGGCGAAAACGACGGCTTGCCCCGGCTGCCCGACCTGGATTACTACCTGTTCGTTCGCAAAAACGTCATCAA
CCCAATCACGCGCAAGGTGTTCGACATGCTCAAGGCCAACCTGGGGCTGATTCGCAGCGCGGCCGAGCCGGTGGCGCCGC
AACGCCTGTTGGCCGCAGATGAGTGA

Upstream 100 bases:

>100_bases
TGAATATGAGTGGAATATCTGTTTGATGGGGCTAATATAGTGAAGTCATATTTTTGAAACAATGCGGAAATAGAGATAAA
TACATTAATATTTGTAATGT

Downstream 100 bases:

>100_bases
TATTTTAGGGCTGCGGCCCTTGTGTGGCGGGTGAATGCAGCTATTGTTTTTGTAGCTATTCTGGCGTCAGCCGCAGCGTC
AATGCCGCGCTCGATGCGGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Pectinase gene transcriptional regulator [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNTLDLELLRALVAIEEQDSFAGAAIHLGKTQSAVTQQMQRLEDQIGHPLFEKQGRHKRLTPHGQKLLDYARHLLAINDD
ALRSLQQGNLEGVLRIGAPHDVADTMLPTLLAQVARASPLLRLDIHVGRSPFLMESLKRGEIDMTISNRNDPALDGVVLR
TSPTVWLCSASYVHDRAKPVPLILVDGPSVFYRLAREALDAAGIRWSPNYTASSLIGIKAALRAGLGVTARGIEMAGADL
RVLGENDGLPRLPDLDYYLFVRKNVINPITRKVFDMLKANLGLIRSAAEPVAPQRLLAADE

Sequences:

>Translated_301_residues
MNTLDLELLRALVAIEEQDSFAGAAIHLGKTQSAVTQQMQRLEDQIGHPLFEKQGRHKRLTPHGQKLLDYARHLLAINDD
ALRSLQQGNLEGVLRIGAPHDVADTMLPTLLAQVARASPLLRLDIHVGRSPFLMESLKRGEIDMTISNRNDPALDGVVLR
TSPTVWLCSASYVHDRAKPVPLILVDGPSVFYRLAREALDAAGIRWSPNYTASSLIGIKAALRAGLGVTARGIEMAGADL
RVLGENDGLPRLPDLDYYLFVRKNVINPITRKVFDMLKANLGLIRSAAEPVAPQRLLAADE
>Mature_301_residues
MNTLDLELLRALVAIEEQDSFAGAAIHLGKTQSAVTQQMQRLEDQIGHPLFEKQGRHKRLTPHGQKLLDYARHLLAINDD
ALRSLQQGNLEGVLRIGAPHDVADTMLPTLLAQVARASPLLRLDIHVGRSPFLMESLKRGEIDMTISNRNDPALDGVVLR
TSPTVWLCSASYVHDRAKPVPLILVDGPSVFYRLAREALDAAGIRWSPNYTASSLIGIKAALRAGLGVTARGIEMAGADL
RVLGENDGLPRLPDLDYYLFVRKNVINPITRKVFDMLKANLGLIRSAAEPVAPQRLLAADE

Specific function: Regulates pectinase gene expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788626, Length=277, Percent_Identity=45.1263537906137, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1787806, Length=156, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI87081904, Length=148, Percent_Identity=31.0810810810811, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082132, Length=238, Percent_Identity=26.890756302521, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788748, Length=167, Percent_Identity=26.9461077844311, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI48994962, Length=155, Percent_Identity=28.3870967741935, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787601, Length=151, Percent_Identity=25.8278145695364, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33017; Mature: 33017

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLDLELLRALVAIEEQDSFAGAAIHLGKTQSAVTQQMQRLEDQIGHPLFEKQGRHKRL
CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
TPHGQKLLDYARHLLAINDDALRSLQQGNLEGVLRIGAPHDVADTMLPTLLAQVARASPL
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCE
LRLDIHVGRSPFLMESLKRGEIDMTISNRNDPALDGVVLRTSPTVWLCSASYVHDRAKPV
EEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCC
PLILVDGPSVFYRLAREALDAAGIRWSPNYTASSLIGIKAALRAGLGVTARGIEMAGADL
EEEEECCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCEECCCEECCCCE
RVLGENDGLPRLPDLDYYLFVRKNVINPITRKVFDMLKANLGLIRSAAEPVAPQRLLAAD
EEEECCCCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
E
C
>Mature Secondary Structure
MNTLDLELLRALVAIEEQDSFAGAAIHLGKTQSAVTQQMQRLEDQIGHPLFEKQGRHKRL
CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
TPHGQKLLDYARHLLAINDDALRSLQQGNLEGVLRIGAPHDVADTMLPTLLAQVARASPL
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCE
LRLDIHVGRSPFLMESLKRGEIDMTISNRNDPALDGVVLRTSPTVWLCSASYVHDRAKPV
EEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCC
PLILVDGPSVFYRLAREALDAAGIRWSPNYTASSLIGIKAALRAGLGVTARGIEMAGADL
EEEEECCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCEECCCEECCCCE
RVLGENDGLPRLPDLDYYLFVRKNVINPITRKVFDMLKANLGLIRSAAEPVAPQRLLAAD
EEEECCCCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626286 [H]