Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yxiO [H]

Identifier: 91787920

GI number: 91787920

Start: 2123488

End: 2124798

Strand: Direct

Name: yxiO [H]

Synonym: Bpro_2044

Alternate gene names: 91787920

Gene position: 2123488-2124798 (Clockwise)

Preceding gene: 91787919

Following gene: 91787923

Centisome position: 40.83

GC content: 63.39

Gene sequence:

>1311_bases
ATGGCCCTTTTTTCCCAGGATGCCCTCAACCCCGGCGTACGCAAGCGCGAGGTGTTTGGCTGGGCCATGTACGACTTTGC
GAACTCGGGCTACACCACTGTCGTGATCACGGCAGTGTTTGCCGCCTATTTCGTGGGCGGCATTGCGCAGAAGGCCGAGT
GGGCCACCTTTGCCTGGACGGCGGCGCTCAGCGTGTCCTACGCGATTGTCATGCTCACCATGCCCAGCATCGGTGCCTAT
GCCGACCTGCGCGCAGCCAAGAAACGGCTGCTGATGCTGACGACGATGGGTTGCGTGGTGACCACCGCAGCGCTCGCGCT
CGCAGGGCCTGGCAGCGTGGCGTTCGCCATGTTGCTGATCATTCTGTCGAACACCTTTTTTTCGTATGGCGAATCACTGA
CCGCCGCCTTCCTGCCGGAGCTGGCCAGGGCCGAGGCCTTGGGCAAGGTCAGCGGCTGGGGCTGGAGTTTTGGCTATTTT
GGCGGCATGCTGGCGCTGGGGCTTTGCCTGGGCTACGTGATTTGGGCCCAAGGCCAGGGCATCAGGGCCGAGCAGTTTGT
TCCCGTCACCATGCTGATCACGGCGGTGATCTACGGCTTGGCATCGCTGGTCACGTTCCGCCTGCTCAATGAACGGGCCC
GGCCCAACCCGGCTGCATTGCGTCAGGGCGGTATCAAGGCTTCGCTTGCGCAGCTGCACCAGACTTTTCGCCAGGCCAGG
CGTTACCGGGATTTCATGTGGCTGCTGGCCTGCGCCGTGTTTTACCAGGGGGGCGTGGCCGTGGCCATCGCGCTGGCTGC
GATTTACGCCGAGCAGGTGATTGGCTTCCAGCCGCAGGAAACCATGGTGCTGATCTTCGTGCTCAACCTTGCAGCCGCCG
GCGGCGCGTTCGCCTTTGGTTATTTCCAGGATCGCATCGGCCACAAGCTGGCGCTAGGCATCACGCTGGTGGGCTGGATC
GCCACTTGCGTGATCGCTGCCGTCACAACGACCAAAGGCGGCTTCTGGTACGCCGCCGCGATCGCGGGCCTGTGCATGGG
CTCGAGCCAGTCGGCTGGCCGCGCCATGGCCGGCATGTTCGCGCCGAAAAGGCAACTGGCGGAGTTTTACGGCCTGTGGA
CCTTCGCGATCCGCCTGGCCAGCATCATCGGGCCGTTAAGCTACGGCGCCATCACCTGGATGACGGGAGGTAACCAGCGC
ATAGCCATTCTGTCGACGGCCGTGCTGTTTGCCGTGGGATTGGTGCTGCTGATTCCGGTGAATGTGCAACGCGGGCGTGA
AGCCGCGCTGCAGGCTGACGCCCAGATCTGA

Upstream 100 bases:

>100_bases
TGCGGTCCGGGCAACTCCGGCCACGGCGGTGGCCGGCAACCGCGCCATCTGCACTGACATCTCCGTGGACTATGCTTGGC
CCCTCTTCAGGAGCTGAACC

Downstream 100 bases:

>100_bases
GGAAGCGCTCAACAAGCCGTTGCGAACGAGGTCGAGGGGATGCCTGCACCTTCCCTCGGGGCGCGCAGGCAGCTATTAAA
AATGTAGCGAATCCACGGTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAY
ADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYF
GGMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR
RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWI
ATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQR
IAILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI

Sequences:

>Translated_436_residues
MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAY
ADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYF
GGMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR
RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWI
ATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQR
IAILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI
>Mature_435_residues
ALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAYA
DLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFG
GMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQARR
YRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWIA
TCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRI
AILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46536; Mature: 46405

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AALSVSYAIVMLTMPSIGAYADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLI
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFGGMLALGLCLGYVIWAQGQG
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
YFQDRIGHKLALGITLVGWIATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHC
APKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRIAILSTAVLFAVGLVLLIPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCC
NVQRGREAALQADAQI
CHHCCHHHHHHCCCCC
>Mature Secondary Structure 
ALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AALSVSYAIVMLTMPSIGAYADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLI
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFGGMLALGLCLGYVIWAQGQG
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
YFQDRIGHKLALGITLVGWIATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHC
APKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRIAILSTAVLFAVGLVLLIPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCC
NVQRGREAALQADAQI
CHHCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]