| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeiH [C]
Identifier: 91787914
GI number: 91787914
Start: 2116630
End: 2117646
Strand: Reverse
Name: yeiH [C]
Synonym: Bpro_2038
Alternate gene names: 91787914
Gene position: 2117646-2116630 (Counterclockwise)
Preceding gene: 91787915
Following gene: 91787910
Centisome position: 40.72
GC content: 64.5
Gene sequence:
>1017_bases ATGCTCAGCTATGCGCGCCCCTGGATCCACCAAACCCGCAGCTTGTGGCCTGGCCTTGCATTGCCGCTGCTCATCATGCT GGGCGCCACCTTCCTCTCCGAGCATTACGGTGGCCCGCAACTGCTCTACGCGCTGCTATTTGGCCTGGCCTTTCACTTCC TGCACCAGGATGCACGCTGCCGGCCCGGCATCGAGTTTTGTGCCAGGACCCTGCTGCGCATCGGCGTGGCCCTGCTGGGT GCGCGCATCACGCTGGCGCAAATCGGGCAGCTCGGTATCGGCCCGCTGGCGACGGCGGCCCTGGGCATTGTCAGCACCAT CGCGCTGGGCGCCTGGCTGGCGCGGCGCTTTGGCCTGAAGACCGACTTTGGCCTGCTTTGCGGTGCGGCTGTGTCCATTT GCGGCGCATCGGCGGCGCTGGCGGTGGCGGCGGTCATGCCCAAAACCGAAGAGAACGAGCGCCACACCTTGCTGACGGTG GTCGGCGTGACGGGCCTGTCAACGCTGGCCATGATTGCCTATCCGCTGCTGGCCAAAGCGCTGCAGTGGAGCGACACCGG CGCCGGCATCTTCCTGGGCGGCACCATCCATGACGTGGCGCAGGTCATAGGCGCGGGCCTGATGATTTCCCATGAAGCGG GCGACGTCGCCGTGATCGTCAAACTGTTTCGCGTCACGCTGCTGGTGCCTGTGGTGGCCGTACTCGCCTGGTATTGGCGA CAGCGCAGCAATGCCCCCAGCAGTGGGAACCGGCAGGCACCGCTGCTGCCTTTTTTCCTGATCGGATTCATGGCCCTGGT GCTGGTCAACAGCCTGGGCGGCCTCACGCCCCGGTTCACAGAGGCCTTGAGCCAGATCTCCCGCATCTGCCTGGTGATCG CCATTTCGGCGCTGGGCATCAAGACCTCGTTTGAAGAACTGCTCAAGCTCGGCTGGCGGCCAATGGCCCTGATGCTGGTG GAGACCCTGTGGCTGGCCACCGTCTTTGTCATTTACCTATGCGTCTTCACGCGATAA
Upstream 100 bases:
>100_bases GCCGCACTCACCGCCTGAGCCAAACGCCATCTCACGCCGCACGCCGGCGTTCCCTTTTGCGGTCCTTTTTATCTTCTTTC CCCCGAGGTCTTGCACAACC
Downstream 100 bases:
>100_bases GTCCACAGGGGGCAGGGCGTGCTCAGGGCGTGGCGGAGGCCGCGGGCTCCTTCCAGCCACCACCCAGCGTTTTGTACAGC GTGACCTGGCTTTGCAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLSYARPWIHQTRSLWPGLALPLLIMLGATFLSEHYGGPQLLYALLFGLAFHFLHQDARCRPGIEFCARTLLRIGVALLG ARITLAQIGQLGIGPLATAALGIVSTIALGAWLARRFGLKTDFGLLCGAAVSICGASAALAVAAVMPKTEENERHTLLTV VGVTGLSTLAMIAYPLLAKALQWSDTGAGIFLGGTIHDVAQVIGAGLMISHEAGDVAVIVKLFRVTLLVPVVAVLAWYWR QRSNAPSSGNRQAPLLPFFLIGFMALVLVNSLGGLTPRFTEALSQISRICLVIAISALGIKTSFEELLKLGWRPMALMLV ETLWLATVFVIYLCVFTR
Sequences:
>Translated_338_residues MLSYARPWIHQTRSLWPGLALPLLIMLGATFLSEHYGGPQLLYALLFGLAFHFLHQDARCRPGIEFCARTLLRIGVALLG ARITLAQIGQLGIGPLATAALGIVSTIALGAWLARRFGLKTDFGLLCGAAVSICGASAALAVAAVMPKTEENERHTLLTV VGVTGLSTLAMIAYPLLAKALQWSDTGAGIFLGGTIHDVAQVIGAGLMISHEAGDVAVIVKLFRVTLLVPVVAVLAWYWR QRSNAPSSGNRQAPLLPFFLIGFMALVLVNSLGGLTPRFTEALSQISRICLVIAISALGIKTSFEELLKLGWRPMALMLV ETLWLATVFVIYLCVFTR >Mature_338_residues MLSYARPWIHQTRSLWPGLALPLLIMLGATFLSEHYGGPQLLYALLFGLAFHFLHQDARCRPGIEFCARTLLRIGVALLG ARITLAQIGQLGIGPLATAALGIVSTIALGAWLARRFGLKTDFGLLCGAAVSICGASAALAVAAVMPKTEENERHTLLTV VGVTGLSTLAMIAYPLLAKALQWSDTGAGIFLGGTIHDVAQVIGAGLMISHEAGDVAVIVKLFRVTLLVPVVAVLAWYWR QRSNAPSSGNRQAPLLPFFLIGFMALVLVNSLGGLTPRFTEALSQISRICLVIAISALGIKTSFEELLKLGWRPMALMLV ETLWLATVFVIYLCVFTR
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=329, Percent_Identity=34.6504559270517, Blast_Score=138, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36258; Mature: 36258
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYARPWIHQTRSLWPGLALPLLIMLGATFLSEHYGGPQLLYALLFGLAFHFLHQDARC CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC RPGIEFCARTLLRIGVALLGARITLAQIGQLGIGPLATAALGIVSTIALGAWLARRFGLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TDFGLLCGAAVSICGASAALAVAAVMPKTEENERHTLLTVVGVTGLSTLAMIAYPLLAKA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQWSDTGAGIFLGGTIHDVAQVIGAGLMISHEAGDVAVIVKLFRVTLLVPVVAVLAWYWR HHCCCCCCCEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRSNAPSSGNRQAPLLPFFLIGFMALVLVNSLGGLTPRFTEALSQISRICLVIAISALGI HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC KTSFEELLKLGWRPMALMLVETLWLATVFVIYLCVFTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSYARPWIHQTRSLWPGLALPLLIMLGATFLSEHYGGPQLLYALLFGLAFHFLHQDARC CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC RPGIEFCARTLLRIGVALLGARITLAQIGQLGIGPLATAALGIVSTIALGAWLARRFGLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TDFGLLCGAAVSICGASAALAVAAVMPKTEENERHTLLTVVGVTGLSTLAMIAYPLLAKA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQWSDTGAGIFLGGTIHDVAQVIGAGLMISHEAGDVAVIVKLFRVTLLVPVVAVLAWYWR HHCCCCCCCEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRSNAPSSGNRQAPLLPFFLIGFMALVLVNSLGGLTPRFTEALSQISRICLVIAISALGI HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC KTSFEELLKLGWRPMALMLVETLWLATVFVIYLCVFTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]