| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yflP [H]
Identifier: 91787885
GI number: 91787885
Start: 2079659
End: 2080618
Strand: Direct
Name: yflP [H]
Synonym: Bpro_2009
Alternate gene names: 91787885
Gene position: 2079659-2080618 (Clockwise)
Preceding gene: 91787881
Following gene: 91787886
Centisome position: 39.99
GC content: 63.75
Gene sequence:
>960_bases ATGCGTCGCGACACCTTTTTGAAATCCCTGGCCGCGCTGGCCGCAGCGGGGGCCTTGCCCCTGCCGGCCCTGGCCGCAGC CAATGTGAAAATGATGATTCCGGCCAATCCTGGCGGCGGTTGGGACACCACCGGCCGTGCCCTGGGCAAGGCCCTGATGG ATTCCGGTGCGGCAGCGACCGTGACCTATGACAACAAGGGCGGTGCCGCCGGTGCGCTGGGTCTGGCCCAGTTCGTCAAT GGCAGCAAGGGCGACCCGAATGCACTGATGGTGATGGGCGCCGTGATGCTGGGCGGCCTGATCACGGGCAAGCCACCGGT CAGCCTGTCGCAGGCCACGCCGATCGCCCGCCTGACCAGCGAATACAACGTGTTTGTGCTGCCCGCCAACTCGCCGTTCA AATCGATGAAAGAGGTGATCGAGCAGCTCAAGAAGGATCCCGGCAGCGTGAAATGGGGCGGCGGCTCGCGCGGCTCCACC GAACACATTGCAGCAGCCATGATTGCCCGTGAAGTGGGCGTGGACCCTTCCAAGATCAATTACGTGGCTTTCCGCGGAGG CGGAGAGGCCACCGCTGCCATTCTGGGCGGCAACGTGACGATAGGCGGCAGCGGCTACAGCGAATTCTCGGAGTACATCA ACTCCGGCAAGATGAAGGCGCTGGCAGTGACCTCCGAAACGCGCCTGAAGGGCGTCAATGTGCCCACGCTCAAGGAGCAG GGCGTGAACGTGGTGATCGGCAACTGGCGCGGCGTCTATGGCGCCCCCGGCATCACCGCCGAGCAGCGCAAGGCGCTCAC CGAGATGATCCTCAAGGCTGTCAAGTCCAAGAGCTGGATGGACGCTTCCGAGAAGAACAACTGGACCCCCGCCGTACTGA CGGGCCCGGCCTTTGACAAGTTCGTCGATGACGACTTTGCCAGCCTGCGTGCCACCATGGTCAAGTCCGGCATGGTCTGA
Upstream 100 bases:
>100_bases TGGGCAGGACATTAGCACTTTCCCCAATGCTTCCGGACAGCCGTTTGACAGGAAGGAGGCGCATGATGGCGGGGTTACCA CACATCCAAGGAGACAACCC
Downstream 100 bases:
>100_bases GGCTCCTGCCTTCATCCTCCCACGGCGCGTTGCCTGAGCCAGGCAGCGTGCCGTTTTCACATTCAGTTCGACCTGTTGGA GAACCATAACAATGACAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRRDTFLKSLAALAAAGALPLPALAAANVKMMIPANPGGGWDTTGRALGKALMDSGAAATVTYDNKGGAAGALGLAQFVN GSKGDPNALMVMGAVMLGGLITGKPPVSLSQATPIARLTSEYNVFVLPANSPFKSMKEVIEQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPSKINYVAFRGGGEATAAILGGNVTIGGSGYSEFSEYINSGKMKALAVTSETRLKGVNVPTLKEQ GVNVVIGNWRGVYGAPGITAEQRKALTEMILKAVKSKSWMDASEKNNWTPAVLTGPAFDKFVDDDFASLRATMVKSGMV
Sequences:
>Translated_319_residues MRRDTFLKSLAALAAAGALPLPALAAANVKMMIPANPGGGWDTTGRALGKALMDSGAAATVTYDNKGGAAGALGLAQFVN GSKGDPNALMVMGAVMLGGLITGKPPVSLSQATPIARLTSEYNVFVLPANSPFKSMKEVIEQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPSKINYVAFRGGGEATAAILGGNVTIGGSGYSEFSEYINSGKMKALAVTSETRLKGVNVPTLKEQ GVNVVIGNWRGVYGAPGITAEQRKALTEMILKAVKSKSWMDASEKNNWTPAVLTGPAFDKFVDDDFASLRATMVKSGMV >Mature_319_residues MRRDTFLKSLAALAAAGALPLPALAAANVKMMIPANPGGGWDTTGRALGKALMDSGAAATVTYDNKGGAAGALGLAQFVN GSKGDPNALMVMGAVMLGGLITGKPPVSLSQATPIARLTSEYNVFVLPANSPFKSMKEVIEQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPSKINYVAFRGGGEATAAILGGNVTIGGSGYSEFSEYINSGKMKALAVTSETRLKGVNVPTLKEQ GVNVVIGNWRGVYGAPGITAEQRKALTEMILKAVKSKSWMDASEKNNWTPAVLTGPAFDKFVDDDFASLRATMVKSGMV
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32982; Mature: 32982
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDTFLKSLAALAAAGALPLPALAAANVKMMIPANPGGGWDTTGRALGKALMDSGAAAT CCHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE VTYDNKGGAAGALGLAQFVNGSKGDPNALMVMGAVMLGGLITGKPPVSLSQATPIARLTS EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC EYNVFVLPANSPFKSMKEVIEQLKKDPGSVKWGGGSRGSTEHIAAAMIAREVGVDPSKIN CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEE YVAFRGGGEATAAILGGNVTIGGSGYSEFSEYINSGKMKALAVTSETRLKGVNVPTLKEQ EEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHCCCEEEEEEECCHHCCCCCCCCHHHC GVNVVIGNWRGVYGAPGITAEQRKALTEMILKAVKSKSWMDASEKNNWTPAVLTGPAFDK CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH FVDDDFASLRATMVKSGMV HHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRDTFLKSLAALAAAGALPLPALAAANVKMMIPANPGGGWDTTGRALGKALMDSGAAAT CCHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE VTYDNKGGAAGALGLAQFVNGSKGDPNALMVMGAVMLGGLITGKPPVSLSQATPIARLTS EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC EYNVFVLPANSPFKSMKEVIEQLKKDPGSVKWGGGSRGSTEHIAAAMIAREVGVDPSKIN CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEE YVAFRGGGEATAAILGGNVTIGGSGYSEFSEYINSGKMKALAVTSETRLKGVNVPTLKEQ EEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHCCCEEEEEEECCHHCCCCCCCCHHHC GVNVVIGNWRGVYGAPGITAEQRKALTEMILKAVKSKSWMDASEKNNWTPAVLTGPAFDK CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHH FVDDDFASLRATMVKSGMV HHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]