Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is bcsP31 [H]

Identifier: 91787880

GI number: 91787880

Start: 2072817

End: 2073833

Strand: Direct

Name: bcsP31 [H]

Synonym: Bpro_2004

Alternate gene names: 91787880

Gene position: 2072817-2073833 (Clockwise)

Preceding gene: 91787879

Following gene: 91787881

Centisome position: 39.86

GC content: 59.88

Gene sequence:

>1017_bases
ATGAGCAAGAAGTTCGCATTGAGCGCATTGAGCGCCTTGAGCACATCGGGCGCCGCGAGTGTCGCAAGTATTGGAATTGC
GATGATCGCTGCCCTGATGTCTGCGCCGGCATTTGCCCAGCAGAAGTTTGTCACCATAGGCACCGGTGGCGTGACGGGTG
TGTATTACGCGGCGGGCGGCGCCATTTGCCGCCTGGTCAACAAGGACCGCGCCAAACACGGCATCCGCTGCTCGGTCGAG
TCCACCGGGGGTTCGGTGTTCAACGTCAACACCATCAAGGCCGGCGAGCTTGATTTCGGTTTTTCGCAGTCGGACGTGCA
GTACAACGCCGTGAAGGGTACAGGCCAGTACAAGGATGCTGGCGCCTACGGCGATTTGCGCGCCGTGTTTGCGGTACACC
CCGAACCCTTCACCGTGGTCGCCCGCAAGGAGGCCAACATCACGAAGTTCGAGGACTTCAAGGGCAAACGTTTCAACGTC
GGCAACCCTGGTTCGGGTACGCGTTCCTCGATGGAGGAATTGCTGGTAGGGATGGGCTGGAAGCTCGGCGATTTTTCGCT
GGCCTCCGAGCTGAAGGCCGATGAGCACGGCCCGGCCCTGTGCGACGGCAAGATCGACGGGTTCTATTACGCGGTGGGCC
ACCCCAGCGCCAATATCCAGGACCCGACCACTACCTGCGGCGCCAAGCTGGTGTCGCTCACCGGTCCGGTGATTGACAAG
CTGGTGGCCGACAAGCCTTATTACGCCAAGGTCACGATTCCCGCCGGCCTGTACCCCAACAACCCGCAGCCCACCATGAC
CTACGGTGTGCTGGCCACGGTCGTCACCTCCAGCAAGACACCGGCCGAAACCGTTTACCAGGTGACCAAGGCCTTGTTTG
ACAACTTCGACGAGTTCAAAAAACTGCACCCGGCGCTGGCCAACCTCAACCCGCAGAACATGATCAAAGATGGCCTGAGC
GCACCGCTGCATGAAGGTGCTGTGCGCTACTACAAGGAAAAAGGCTGGATCAAATAA

Upstream 100 bases:

>100_bases
AGCGAAGCGGAACTGACCATGATGGTTGAGCGCCTGGGTTCGGCGATGGATGCCGCGATAGCGGCAGCGTAAAGATTTTT
TTACAACCTGGAGAACTGAA

Downstream 100 bases:

>100_bases
ATTCCTTCCGATGTCAACGAGCCGGGCCGGGAGCGTCATGTCTCCTGGCCTTTTTTAATAGAAGAATAAAGACGGTATGG
AAGGGCGGTGATGGCGCAAC

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSKKFALSALSALSTSGAASVASIGIAMIAALMSAPAFAQQKFVTIGTGGVTGVYYAAGGAICRLVNKDRAKHGIRCSVE
STGGSVFNVNTIKAGELDFGFSQSDVQYNAVKGTGQYKDAGAYGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNV
GNPGSGTRSSMEELLVGMGWKLGDFSLASELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTTCGAKLVSLTGPVIDK
LVADKPYYAKVTIPAGLYPNNPQPTMTYGVLATVVTSSKTPAETVYQVTKALFDNFDEFKKLHPALANLNPQNMIKDGLS
APLHEGAVRYYKEKGWIK

Sequences:

>Translated_338_residues
MSKKFALSALSALSTSGAASVASIGIAMIAALMSAPAFAQQKFVTIGTGGVTGVYYAAGGAICRLVNKDRAKHGIRCSVE
STGGSVFNVNTIKAGELDFGFSQSDVQYNAVKGTGQYKDAGAYGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNV
GNPGSGTRSSMEELLVGMGWKLGDFSLASELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTTCGAKLVSLTGPVIDK
LVADKPYYAKVTIPAGLYPNNPQPTMTYGVLATVVTSSKTPAETVYQVTKALFDNFDEFKKLHPALANLNPQNMIKDGLS
APLHEGAVRYYKEKGWIK
>Mature_337_residues
SKKFALSALSALSTSGAASVASIGIAMIAALMSAPAFAQQKFVTIGTGGVTGVYYAAGGAICRLVNKDRAKHGIRCSVES
TGGSVFNVNTIKAGELDFGFSQSDVQYNAVKGTGQYKDAGAYGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNVG
NPGSGTRSSMEELLVGMGWKLGDFSLASELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTTCGAKLVSLTGPVIDKL
VADKPYYAKVTIPAGLYPNNPQPTMTYGVLATVVTSSKTPAETVYQVTKALFDNFDEFKKLHPALANLNPQNMIKDGLSA
PLHEGAVRYYKEKGWIK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168
- InterPro:   IPR011852 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35859; Mature: 35728

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKFALSALSALSTSGAASVASIGIAMIAALMSAPAFAQQKFVTIGTGGVTGVYYAAGG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCEEEEECCC
AICRLVNKDRAKHGIRCSVESTGGSVFNVNTIKAGELDFGFSQSDVQYNAVKGTGQYKDA
HHEEHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GAYGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNVGNPGSGTRSSMEELLVGMGW
CCCCCEEEEEEECCCCEEEEEECCCCCCCHHCCCCCEECCCCCCCCCHHHHHHHHHHCCC
KLGDFSLASELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTTCGAKLVSLTGPVIDK
CCCCHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVADKPYYAKVTIPAGLYPNNPQPTMTYGVLATVVTSSKTPAETVYQVTKALFDNFDEFK
HHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH
KLHPALANLNPQNMIKDGLSAPLHEGAVRYYKEKGWIK
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKKFALSALSALSTSGAASVASIGIAMIAALMSAPAFAQQKFVTIGTGGVTGVYYAAGG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCEEEEECCC
AICRLVNKDRAKHGIRCSVESTGGSVFNVNTIKAGELDFGFSQSDVQYNAVKGTGQYKDA
HHEEHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GAYGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNVGNPGSGTRSSMEELLVGMGW
CCCCCEEEEEEECCCCEEEEEECCCCCCCHHCCCCCEECCCCCCCCCHHHHHHHHHHCCC
KLGDFSLASELKADEHGPALCDGKIDGFYYAVGHPSANIQDPTTTCGAKLVSLTGPVIDK
CCCCHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVADKPYYAKVTIPAGLYPNNPQPTMTYGVLATVVTSSKTPAETVYQVTKALFDNFDEFK
HHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH
KLHPALANLNPQNMIKDGLSAPLHEGAVRYYKEKGWIK
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3133283 [H]