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The map label for this gene is ybgF [C]

Identifier: 91787862

GI number: 91787862

Start: 2053462

End: 2054223

Strand: Direct

Name: ybgF [C]

Synonym: Bpro_1986

Alternate gene names: 91787862

Gene position: 2053462-2054223 (Clockwise)

Preceding gene: 91787861

Following gene: 91787863

Centisome position: 39.49

GC content: 59.71

Gene sequence:

>762_bases
GTGAGCATGTTCAGATTTGCGGCGTCTGTTGCGGCCTGCCTGCTGGCATTCAATGCGCACGCCGCGCTTTTCGAAGACGA
TGAGGCGCGCAGGGCCATCCTGGATTTGCGGCAAAAAGTCGACGCTTCGCAGCAGCGCACGGCTGATGACCTGCGCAGGG
CCAATGATGACAATGCCCAGTTGCGTCGCAGCCTGCTTGAGCTTTCCAACCAGATCGAGGCCCTGCGCAACGAGATGGCC
GGCATGCGCGGACAGAACGAGAGGCTGGCCCGGGACGTTGCCGATATTCAGCGCAACCAGAAGGACATTACGCAGGGCGT
TGACGAGCGGCTGCGAAAGTTTGAACCCACCAAGATATCCGTGGACGGCAAGGAGTTTGTGGCGGAGCCGGCTGAAAAGC
AGGAGTTCGAGGCGGCGCTTGCCACCTTGCGCAAAGGTGACTTTGCTGCCGCTCAAACCAGTTTTGTGGCCTTCATGAAA
CGCTACCCGCAAAGCGGCTACACCTCTTCGGCGCTGTTCTGGCTGGGTAATGCCCAGTACGCTTTGCGCAACTATCGGGA
TGCGGTGGCCAATTTCCGCACCCTGGTGACACTCGAACCCGGTCACATGCGTGCGCCGGAAGCGCTGTTGTCGATGGCCA
ATTGCCAGGTTGAACTCAAGGATGTCAAGTCAGCGCGCAAGACGCTGGAAGACCTCGTCAAGGCCTATCCGCAATCAGAA
GCCGCGTCGGTTGCCAAGGAGCGCCTGGTTCGGCTCAAGTAG

Upstream 100 bases:

>100_bases
TTTTGGCAAGGAAAAACCTGCCGCCACGGGCTCGGACGAAGATTCCATGGCGAAAAATCGTCGCGCCGAGATCAACTACC
GCTAAGCCGGGATCATTGTT

Downstream 100 bases:

>100_bases
CCCCCACGGACTTTGGGTCGCCTGGCGGCCGGTCCGGCTGTTTTTCGTTCCCACTTAAAATTCGGGGATGGATACTTCCG
GATCTGCCGTGCTCGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSMFRFAASVAACLLAFNAHAALFEDDEARRAILDLRQKVDASQQRTADDLRRANDDNAQLRRSLLELSNQIEALRNEMA
GMRGQNERLARDVADIQRNQKDITQGVDERLRKFEPTKISVDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMK
RYPQSGYTSSALFWLGNAQYALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE
AASVAKERLVRLK

Sequences:

>Translated_253_residues
MSMFRFAASVAACLLAFNAHAALFEDDEARRAILDLRQKVDASQQRTADDLRRANDDNAQLRRSLLELSNQIEALRNEMA
GMRGQNERLARDVADIQRNQKDITQGVDERLRKFEPTKISVDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMK
RYPQSGYTSSALFWLGNAQYALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE
AASVAKERLVRLK
>Mature_252_residues
SMFRFAASVAACLLAFNAHAALFEDDEARRAILDLRQKVDASQQRTADDLRRANDDNAQLRRSLLELSNQIEALRNEMAG
MRGQNERLARDVADIQRNQKDITQGVDERLRKFEPTKISVDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMKR
YPQSGYTSSALFWLGNAQYALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSEA
ASVAKERLVRLK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28492; Mature: 28360

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMFRFAASVAACLLAFNAHAALFEDDEARRAILDLRQKVDASQQRTADDLRRANDDNAQ
CCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
LRRSLLELSNQIEALRNEMAGMRGQNERLARDVADIQRNQKDITQGVDERLRKFEPTKIS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQY
CCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCHHH
ALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
AASVAKERLVRLK
HHHHHHHHHHCCC
>Mature Secondary Structure 
SMFRFAASVAACLLAFNAHAALFEDDEARRAILDLRQKVDASQQRTADDLRRANDDNAQ
CHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
LRRSLLELSNQIEALRNEMAGMRGQNERLARDVADIQRNQKDITQGVDERLRKFEPTKIS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQY
CCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEECCHHH
ALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
AASVAKERLVRLK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]