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The map label for this gene is pal [H]

Identifier: 91787861

GI number: 91787861

Start: 2052904

End: 2053446

Strand: Direct

Name: pal [H]

Synonym: Bpro_1985

Alternate gene names: 91787861

Gene position: 2052904-2053446 (Clockwise)

Preceding gene: 91787860

Following gene: 91787862

Centisome position: 39.48

GC content: 60.41

Gene sequence:

>543_bases
ATGAAGCTGAAGCGCGTTCTCTTTTCCATCTTCTCCTCCCTGGCTCTTGCTGCCACGCTGGTGGCCTGCGGCTCCAATGT
CAAGCTCAGTGATGTGCCGGTGGAAGACAGGACAGCCAGTGCCAAGCCGTCTGGCGATGCGGGTGCCTCCTCCAGCAGGG
GAGTCGCACCGGTGCAAATTGGCGGCACGGATGTGTCGGGCGCGGGGCCTGCCAATACGGCGAGAGTTATTTACTTTGAT
TTCGACAGCTACGTCATCAAACCCGAATTCCAGGGGATCGTTGAGGCCCATGCACGCTATCTGACGGCCAACAAGGCCCG
CAAGATGGCCATCGAAGGACACACCGACGAGCGCGGTGGCCGCGAATACAACCTCGCGCTGGGGCAGAGACGCTCTGAAG
CCGTACGCCGCGCGCTGGGACTTCTGGGTGTTGCTGATGCGCAGGTGGAGGCCGTGAGTTTTGGCAAGGAAAAACCTGCC
GCCACGGGCTCGGACGAAGATTCCATGGCGAAAAATCGTCGCGCCGAGATCAACTACCGCTAA

Upstream 100 bases:

>100_bases
GCGCCGGCGGCGACATCCGTGAGCCCGACTGGGGACCTTTCCAGCGGTGACAGGCACTTTTTTTGAATCATCTTTTTTTG
TTTTTTTGTAGAGGTACTCC

Downstream 100 bases:

>100_bases
GCCGGGATCATTGTTGTGAGCATGTTCAGATTTGCGGCGTCTGTTGCGGCCTGCCTGCTGGCATTCAATGCGCACGCCGC
GCTTTTCGAAGACGATGAGG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQIGGTDVSGAGPANTARVIYFD
FDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGGREYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPA
ATGSDEDSMAKNRRAEINYR

Sequences:

>Translated_180_residues
MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQIGGTDVSGAGPANTARVIYFD
FDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGGREYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPA
ATGSDEDSMAKNRRAEINYR
>Mature_180_residues
MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQIGGTDVSGAGPANTARVIYFD
FDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGGREYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPA
ATGSDEDSMAKNRRAEINYR

Specific function: Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=179, Percent_Identity=35.7541899441341, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19091; Mature: 19091

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQI
CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
GGTDVSGAGPANTARVIYFDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGG
CCCCCCCCCCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC
REYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPAATGSDEDSMAKNRRAEINYR
CEEEHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQI
CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
GGTDVSGAGPANTARVIYFDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGG
CCCCCCCCCCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC
REYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPAATGSDEDSMAKNRRAEINYR
CEEEHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]