The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787856

Identifier: 91787856

GI number: 91787856

Start: 2047500

End: 2048690

Strand: Reverse

Name: 91787856

Synonym: Bpro_1980

Alternate gene names: NA

Gene position: 2048690-2047500 (Counterclockwise)

Preceding gene: 91787857

Following gene: 91787855

Centisome position: 39.4

GC content: 54.32

Gene sequence:

>1191_bases
ATGGCGGTCATCAGCATTTCCAAACTCTTGCTGTTCATCTTTGCGGCTGCGACTCTGCTGTTTTTCGAGCGCAGGTCGGT
GGGCAGCCCAGCGCTTGCCAGAACATACACCCCTACAGCTGTTCTAGTAGTCCTTCTCGCATTCACTATAAGTCTGTTCT
GGACGACTGCCCCGTCGGCAGATGCCATGGGATCGATAGCGAAGTACGGCAAGCTCCTCCTGATTGTGCTGATGATGACC
TTGATCCAGGATCGGCGCGAGGCCATGTATGCGCTTGGCGCGTTTGTTCTAGCCCAATTGTTTCTCATGCTCAGTTCATG
GATGCTGTTCATTCACCTGCCGGTTCCCTGGGCAACGTCCCGCATGGCGCTGAAAGAGTTCGCGGTGTTTTCAAGCTACC
TCGATCAAGGCATCATAGGTGCCGTACTTGCAGCCATCTGCTGGCATCTGCGTCATCTCGCACCGGGTCGATTTGGCCCG
CACTTCGCGGTTCTCGCGGCTCTGGCTTATTTGTGCAATGTGCTCTTTGTTCTGAACGGACGAAGCGGACACTTGGTCGC
CATTGCCATGCTGTCCCTTGCGATCATGTGGGAACTTCCGAAGCGATACCGCGCAGCCGTCGTCCTGTTGCCGTTTGTCC
TGGTTGGGGCTCTGTTTCTTAGCTCGCACAAAGTGCGCGATCGATTAATCATGATGAAGATGGAAGTGGAGTCGCATTCA
GCACACGCTCAACCCAATACGTCGTCGGGTCTCCGGCTCCATTTTTGGATGAACTCTATTCAAATGATTGCCCGGCATCC
GGTTGCTGGATCGGGGGTTGGTAGCTGGAGCACCGAATACAACCGCATCCAACGCGATCTTGATCCGGCGCATAAAGATA
TAGCAGGCAACTTTAACCCGCATCAGGAATTTCTCTTGTGGGCGGTTCAATTGGGAATTCCGGGTCTTCTGCTTCTTTGC
GGTTTAATGCTGGCGATGATTCGGGATTCGTGGACTATGGAGAAACCCTATGCGCGAGTCGTGCAATCCACCGTAGTGGC
TTTGGCCGTCGCCTGCCTTTTCAACGCAAGCATTTACGACGCCCTGATAGGCGATTTTTTTGCTGTGACGCTCGGCTTAT
TGCTGGCTCTGGGACTCACTGCCAACGCAAGTAAGCCCTCCGCCATGTCCGCTCAACCCGGGGCGATATGA

Upstream 100 bases:

>100_bases
CCAATCAAATCTTGAAATATCCCGTACTAATTTGATTAAGCAGACCGCCAATGTTCGACTCGCCGTGATTTGCCTGGCCG
CTGCATCGGTGGGTTTGTCA

Downstream 100 bases:

>100_bases
CGCAGCTGTCAGAGCCCGTACCCGTTAGCTTAGCCGCCAGGCGATCCTTGTGGCAAAGGGTCGCGCGCGTCTGGCCCTAT
TTCAGCGGCTCGCGGGCAGG

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Ligase; Lipid A Core; O-Antigen Biosynthesis Protein Wzy_C Domain Protein; Inner Membrane Protein

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MAVISISKLLLFIFAAATLLFFERRSVGSPALARTYTPTAVLVVLLAFTISLFWTTAPSADAMGSIAKYGKLLLIVLMMT
LIQDRREAMYALGAFVLAQLFLMLSSWMLFIHLPVPWATSRMALKEFAVFSSYLDQGIIGAVLAAICWHLRHLAPGRFGP
HFAVLAALAYLCNVLFVLNGRSGHLVAIAMLSLAIMWELPKRYRAAVVLLPFVLVGALFLSSHKVRDRLIMMKMEVESHS
AHAQPNTSSGLRLHFWMNSIQMIARHPVAGSGVGSWSTEYNRIQRDLDPAHKDIAGNFNPHQEFLLWAVQLGIPGLLLLC
GLMLAMIRDSWTMEKPYARVVQSTVVALAVACLFNASIYDALIGDFFAVTLGLLLALGLTANASKPSAMSAQPGAI

Sequences:

>Translated_396_residues
MAVISISKLLLFIFAAATLLFFERRSVGSPALARTYTPTAVLVVLLAFTISLFWTTAPSADAMGSIAKYGKLLLIVLMMT
LIQDRREAMYALGAFVLAQLFLMLSSWMLFIHLPVPWATSRMALKEFAVFSSYLDQGIIGAVLAAICWHLRHLAPGRFGP
HFAVLAALAYLCNVLFVLNGRSGHLVAIAMLSLAIMWELPKRYRAAVVLLPFVLVGALFLSSHKVRDRLIMMKMEVESHS
AHAQPNTSSGLRLHFWMNSIQMIARHPVAGSGVGSWSTEYNRIQRDLDPAHKDIAGNFNPHQEFLLWAVQLGIPGLLLLC
GLMLAMIRDSWTMEKPYARVVQSTVVALAVACLFNASIYDALIGDFFAVTLGLLLALGLTANASKPSAMSAQPGAI
>Mature_395_residues
AVISISKLLLFIFAAATLLFFERRSVGSPALARTYTPTAVLVVLLAFTISLFWTTAPSADAMGSIAKYGKLLLIVLMMTL
IQDRREAMYALGAFVLAQLFLMLSSWMLFIHLPVPWATSRMALKEFAVFSSYLDQGIIGAVLAAICWHLRHLAPGRFGPH
FAVLAALAYLCNVLFVLNGRSGHLVAIAMLSLAIMWELPKRYRAAVVLLPFVLVGALFLSSHKVRDRLIMMKMEVESHSA
HAQPNTSSGLRLHFWMNSIQMIARHPVAGSGVGSWSTEYNRIQRDLDPAHKDIAGNFNPHQEFLLWAVQLGIPGLLLLCG
LMLAMIRDSWTMEKPYARVVQSTVVALAVACLFNASIYDALIGDFFAVTLGLLLALGLTANASKPSAMSAQPGAI

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43359; Mature: 43228

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVISISKLLLFIFAAATLLFFERRSVGSPALARTYTPTAVLVVLLAFTISLFWTTAPSA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCH
DAMGSIAKYGKLLLIVLMMTLIQDRREAMYALGAFVLAQLFLMLSSWMLFIHLPVPWATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RMALKEFAVFSSYLDQGIIGAVLAAICWHLRHLAPGRFGPHFAVLAALAYLCNVLFVLNG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
RSGHLVAIAMLSLAIMWELPKRYRAAVVLLPFVLVGALFLSSHKVRDRLIMMKMEVESHS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCC
AHAQPNTSSGLRLHFWMNSIQMIARHPVAGSGVGSWSTEYNRIQRDLDPAHKDIAGNFNP
CCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCC
HQEFLLWAVQLGIPGLLLLCGLMLAMIRDSWTMEKPYARVVQSTVVALAVACLFNASIYD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIGDFFAVTLGLLLALGLTANASKPSAMSAQPGAI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVISISKLLLFIFAAATLLFFERRSVGSPALARTYTPTAVLVVLLAFTISLFWTTAPSA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCH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HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA