Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787811

Identifier: 91787811

GI number: 91787811

Start: 1993564

End: 1994724

Strand: Reverse

Name: 91787811

Synonym: Bpro_1934

Alternate gene names: NA

Gene position: 1994724-1993564 (Counterclockwise)

Preceding gene: 91787812

Following gene: 91787810

Centisome position: 38.36

GC content: 58.23

Gene sequence:

>1161_bases
ATGGCTACCGAACTCAACATCCGCGCCGACACCCTCGGAGCAAAGCTGCGGCATGCCCGCACGATACACAGGCTTACGCA
GGAGGTTGCCGCAACGAAGCTCGACTTAGCCCGCACCACGCTAGTCGCAATTGAAGCTGGCAAACGACCTGTATCGAGCC
AAGAGCTTCGGCAGTTTTCCGAGCTATACGACATCTCGGAGAGCGAGCTCCTCAACGAGAGGGAAGCCCACATTGAGCTT
GGAGTCCACTTCCGCAGCTCTCCCACGGCCAAACAAGCTGACGACGAAGTTCTAGTGGCCAACATGCTTAACCGCCTGGC
TAACTCCACCCTCCAGATTGAGGCATTGCTGGGCCAGGCCCCTCGCAACGTTGACCTGCCAACCGTAGATGTTCCAAAGA
CGGGTTCACTTGAACGGCACGCAGAGGATGCCGCACTCAACTTGCGCTCTCGCTTTGGCATCGGGATGGGCCCCATCCAG
AATCTCTGGGCATTGATGGAGTTTGAAATGGGCCTTCGTGTGTTCGAGCGCCCTCTACCCTCAAGGATTTCCGGCGCAGT
AGCATTTGACGCGAAGGTCGGCGGCTTCGTCTTGTTGAACTCACTGCATCCTTTACCCAGGCGGCGTGTAACTGGCGTCC
ACGAGGCTGGCCATATTGTCACCCGCACCACGGGCATCTCCGTTCATTTCGACGGGCAGCCGTCCTCCGACCGCACTGAG
CGGTTCTGCGACCTCCTGGGCATTGCCTTCCTGACGCCAGCTGCCGCGTTGCGGCGCAAAGCGAAGGAACTCAAGGAGAT
GTCAGGGGAGTTCTCGGTCAGGCAGCTGTTAATGCTGGCCGTCTTTTTTGGCGTTTCCATTGAGGCAATAACGCGACGCA
TGGAAACCTTGGAAATGCTGCCTCTAGGAACTTTCGAGTCGCTTCGCACGCAGAAGGTCGGCCTTGAGCACCGCCGACGA
GTCGCAGAGGAGATGAGCGTTATCGAGGAAGGACGGCCATTTACGCCTCGGGCACTTATGCTCGCAAGTATTGCCCACGA
GCGCGAACTCCTTTCCGAGCAGCAAATTGCTTCCATGCTAGAGCTGAACCTCGTCGATGTGCGCCAGGCGCTCGAGGAGC
ACCAGGGGGATGGGGAGATGGTGCTTGAACTTGCTGAGTGA

Upstream 100 bases:

>100_bases
CAGTTGGAGAAATTCCTTAAACAACACCAGACTGAGTGGTCACAATTTCTCGATGAATGCGGCCCACAGTCGTGGGTCGC
GGACCTCGCCAGGAACTGAC

Downstream 100 bases:

>100_bases
CTATCTGCCGAGCGGCCAGCCGGTCCTGGACGCCAGCGTCATCATCAACTTGCTCGGCACCAAGGAGCCAGTTGCGATTT
TCGATGCTCTTGGACACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Conserved Domain Protein

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MATELNIRADTLGAKLRHARTIHRLTQEVAATKLDLARTTLVAIEAGKRPVSSQELRQFSELYDISESELLNEREAHIEL
GVHFRSSPTAKQADDEVLVANMLNRLANSTLQIEALLGQAPRNVDLPTVDVPKTGSLERHAEDAALNLRSRFGIGMGPIQ
NLWALMEFEMGLRVFERPLPSRISGAVAFDAKVGGFVLLNSLHPLPRRRVTGVHEAGHIVTRTTGISVHFDGQPSSDRTE
RFCDLLGIAFLTPAAALRRKAKELKEMSGEFSVRQLLMLAVFFGVSIEAITRRMETLEMLPLGTFESLRTQKVGLEHRRR
VAEEMSVIEEGRPFTPRALMLASIAHERELLSEQQIASMLELNLVDVRQALEEHQGDGEMVLELAE

Sequences:

>Translated_386_residues
MATELNIRADTLGAKLRHARTIHRLTQEVAATKLDLARTTLVAIEAGKRPVSSQELRQFSELYDISESELLNEREAHIEL
GVHFRSSPTAKQADDEVLVANMLNRLANSTLQIEALLGQAPRNVDLPTVDVPKTGSLERHAEDAALNLRSRFGIGMGPIQ
NLWALMEFEMGLRVFERPLPSRISGAVAFDAKVGGFVLLNSLHPLPRRRVTGVHEAGHIVTRTTGISVHFDGQPSSDRTE
RFCDLLGIAFLTPAAALRRKAKELKEMSGEFSVRQLLMLAVFFGVSIEAITRRMETLEMLPLGTFESLRTQKVGLEHRRR
VAEEMSVIEEGRPFTPRALMLASIAHERELLSEQQIASMLELNLVDVRQALEEHQGDGEMVLELAE
>Mature_385_residues
ATELNIRADTLGAKLRHARTIHRLTQEVAATKLDLARTTLVAIEAGKRPVSSQELRQFSELYDISESELLNEREAHIELG
VHFRSSPTAKQADDEVLVANMLNRLANSTLQIEALLGQAPRNVDLPTVDVPKTGSLERHAEDAALNLRSRFGIGMGPIQN
LWALMEFEMGLRVFERPLPSRISGAVAFDAKVGGFVLLNSLHPLPRRRVTGVHEAGHIVTRTTGISVHFDGQPSSDRTER
FCDLLGIAFLTPAAALRRKAKELKEMSGEFSVRQLLMLAVFFGVSIEAITRRMETLEMLPLGTFESLRTQKVGLEHRRRV
AEEMSVIEEGRPFTPRALMLASIAHERELLSEQQIASMLELNLVDVRQALEEHQGDGEMVLELAE

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42985; Mature: 42854

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATELNIRADTLGAKLRHARTIHRLTQEVAATKLDLARTTLVAIEAGKRPVSSQELRQFS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHH
ELYDISESELLNEREAHIELGVHFRSSPTAKQADDEVLVANMLNRLANSTLQIEALLGQA
HHHCCCHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCC
PRNVDLPTVDVPKTGSLERHAEDAALNLRSRFGIGMGPIQNLWALMEFEMGLRVFERPLP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SRISGAVAFDAKVGGFVLLNSLHPLPRRRVTGVHEAGHIVTRTTGISVHFDGQPSSDRTE
HHHCCCEEEECCCCCCCEECCCCCCCHHHHCCCHHCCCEEEEEEEEEEEECCCCCCHHHH
RFCDLLGIAFLTPAAALRRKAKELKEMSGEFSVRQLLMLAVFFGVSIEAITRRMETLEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PLGTFESLRTQKVGLEHRRRVAEEMSVIEEGRPFTPRALMLASIAHERELLSEQQIASML
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELNLVDVRQALEEHQGDGEMVLELAE
HHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
ATELNIRADTLGAKLRHARTIHRLTQEVAATKLDLARTTLVAIEAGKRPVSSQELRQFS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHH
ELYDISESELLNEREAHIELGVHFRSSPTAKQADDEVLVANMLNRLANSTLQIEALLGQA
HHHCCCHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCC
PRNVDLPTVDVPKTGSLERHAEDAALNLRSRFGIGMGPIQNLWALMEFEMGLRVFERPLP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SRISGAVAFDAKVGGFVLLNSLHPLPRRRVTGVHEAGHIVTRTTGISVHFDGQPSSDRTE
HHHCCCEEEECCCCCCCEECCCCCCCHHHHCCCHHCCCEEEEEEEEEEEECCCCCCHHHH
RFCDLLGIAFLTPAAALRRKAKELKEMSGEFSVRQLLMLAVFFGVSIEAITRRMETLEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PLGTFESLRTQKVGLEHRRRVAEEMSVIEEGRPFTPRALMLASIAHERELLSEQQIASML
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELNLVDVRQALEEHQGDGEMVLELAE
HHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA