| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787812
Identifier: 91787812
GI number: 91787812
Start: 1994726
End: 1996126
Strand: Reverse
Name: 91787812
Synonym: Bpro_1935
Alternate gene names: NA
Gene position: 1996126-1994726 (Counterclockwise)
Preceding gene: 91787813
Following gene: 91787811
Centisome position: 38.39
GC content: 58.03
Gene sequence:
>1401_bases ATGAACACCCAACTGCAGGAATCCCATTCACCCGCGGCTAGCTGCTCGGTGCTGCTTTACGAGCACAGGGCACCGCGCCG CGCCAACAATTCCATCAAACTGAAGCTCGGAGACCATGTCCGTATTAAGGCAGAGCACATCCAACGGTACTGCTTCGTCG AAGGCGACCCGTTGCAAGATGACCTCGCTGCTGTCCTAAGCGGAGTTCGCATGGCCGACCGAGCCTGCAACCGCCAGCAC AGCAAAGGCTGGGCCCGGAACTTGAACGTCGAGGTCCCCGTCTATGACCTCTGCAAGTGGCAGTCGGCAGAGGTCATGGG CAGCCTCACCGACGCCCTTCGGTACTTGACCGGCGACCAGTGGCACTTTGAATTCAAGCAGCGTAAGGAACGCCCCGGCA ACTCTGGGCAAGCACACCTTGTGGACCTGCCGGCGCAGGAACGAGTCTTCATGCCGTACAGCAACGGCCTGGACTCCTTC GCACTGGCCAATCAGGTTCAGAGAGATTCTTCCACGACTGAACTCATTCTGATCAATGTTCAAGCCGCCCACCGACTGAC GAACTGGAAAAACTTGGGGCGAGCGCGTGACAAAGACATGCAGGCCGTCCAGGTAGCCGTCTTTTTCAATGAGCCTCATC GCACCGAACCGAGCTTCAGGTCCAGGCCCTTCATTTACGACATGTTGGCTGGGTACGGCGCATCCTTGGCTCAGCCTGCG AAGGTAGTCATCCCGGAAAACGGTCAAGGTAGCCTCGGCGGCTCACTGGTGCCTCTGGGTGACGAAGCCCCACACCGCAG CTGCCACCCCGGCTTCACTTCTCGGCTGACCAGGCTCGTCAATGCGCTGACCAACGTCACGGTACGATTCGAGCACCCTG CACTCTTTCAGACGAAAGGCCAAGTGCTTGCTCAACTGGCCTCTCAAAAGTCAGCCAGTGAGGCATGGCTGGCTGGCCAT CGCTCGTGCTCTTACGATGCCCGCCACTCTAGTCAAGACAAGAGGAGCATGCACTGCGGCGTGTGTGGTAACTGCCTTTT ACGACGTGTTGCCCTGAAGTGGACAGGCATCGAAGACACCACTGACTATCGTGCTGACGACTTAACTGCGACCACCTTTG AAGGGTCGTTCCGAGGTATCGTGCCGCGCATCCACAAGTCGAACCACGACGTAGCTTTCAACAGCATTCGCGCCATGCAG CGTATGGCAGACCTGGCAAACAGCCCGCAGAACACTCGCGTGGCCACAGAGGCTGCCAGCCTGTCTCGTGCGCTAGGCGA GCCTATACAAGAAGTGAGAACACAGTTGGAGAAATTCCTTAAACAACACCAGACTGAGTGGTCACAATTTCTCGATGAAT GCGGCCCACAGTCGTGGGTCGCGGACCTCGCCAGGAACTGA
Upstream 100 bases:
>100_bases GAGCTGCAACTTATCGGAGCCCCCTGCACCGAAGCCGCGCCAGCGACGCAAGTCCGTCGAGCAGGCGCTCGACATGGCCT TACCAACTAACTTCTGAGCC
Downstream 100 bases:
>100_bases CATGGCTACCGAACTCAACATCCGCGCCGACACCCTCGGAGCAAAGCTGCGGCATGCCCGCACGATACACAGGCTTACGC AGGAGGTTGCCGCAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MNTQLQESHSPAASCSVLLYEHRAPRRANNSIKLKLGDHVRIKAEHIQRYCFVEGDPLQDDLAAVLSGVRMADRACNRQH SKGWARNLNVEVPVYDLCKWQSAEVMGSLTDALRYLTGDQWHFEFKQRKERPGNSGQAHLVDLPAQERVFMPYSNGLDSF ALANQVQRDSSTTELILINVQAAHRLTNWKNLGRARDKDMQAVQVAVFFNEPHRTEPSFRSRPFIYDMLAGYGASLAQPA KVVIPENGQGSLGGSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKGQVLAQLASQKSASEAWLAGH RSCSYDARHSSQDKRSMHCGVCGNCLLRRVALKWTGIEDTTDYRADDLTATTFEGSFRGIVPRIHKSNHDVAFNSIRAMQ RMADLANSPQNTRVATEAASLSRALGEPIQEVRTQLEKFLKQHQTEWSQFLDECGPQSWVADLARN
Sequences:
>Translated_466_residues MNTQLQESHSPAASCSVLLYEHRAPRRANNSIKLKLGDHVRIKAEHIQRYCFVEGDPLQDDLAAVLSGVRMADRACNRQH SKGWARNLNVEVPVYDLCKWQSAEVMGSLTDALRYLTGDQWHFEFKQRKERPGNSGQAHLVDLPAQERVFMPYSNGLDSF ALANQVQRDSSTTELILINVQAAHRLTNWKNLGRARDKDMQAVQVAVFFNEPHRTEPSFRSRPFIYDMLAGYGASLAQPA KVVIPENGQGSLGGSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKGQVLAQLASQKSASEAWLAGH RSCSYDARHSSQDKRSMHCGVCGNCLLRRVALKWTGIEDTTDYRADDLTATTFEGSFRGIVPRIHKSNHDVAFNSIRAMQ RMADLANSPQNTRVATEAASLSRALGEPIQEVRTQLEKFLKQHQTEWSQFLDECGPQSWVADLARN >Mature_466_residues MNTQLQESHSPAASCSVLLYEHRAPRRANNSIKLKLGDHVRIKAEHIQRYCFVEGDPLQDDLAAVLSGVRMADRACNRQH SKGWARNLNVEVPVYDLCKWQSAEVMGSLTDALRYLTGDQWHFEFKQRKERPGNSGQAHLVDLPAQERVFMPYSNGLDSF ALANQVQRDSSTTELILINVQAAHRLTNWKNLGRARDKDMQAVQVAVFFNEPHRTEPSFRSRPFIYDMLAGYGASLAQPA KVVIPENGQGSLGGSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKGQVLAQLASQKSASEAWLAGH RSCSYDARHSSQDKRSMHCGVCGNCLLRRVALKWTGIEDTTDYRADDLTATTFEGSFRGIVPRIHKSNHDVAFNSIRAMQ RMADLANSPQNTRVATEAASLSRALGEPIQEVRTQLEKFLKQHQTEWSQFLDECGPQSWVADLARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52184; Mature: 52184
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQLQESHSPAASCSVLLYEHRAPRRANNSIKLKLGDHVRIKAEHIQRYCFVEGDPLQD CCCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEHHHHHHEEEECCCCCHH DLAAVLSGVRMADRACNRQHSKGWARNLNVEVPVYDLCKWQSAEVMGSLTDALRYLTGDQ HHHHHHHHHHHHHHHHCHHHCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCC WHFEFKQRKERPGNSGQAHLVDLPAQERVFMPYSNGLDSFALANQVQRDSSTTELILINV EEEHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEE QAAHRLTNWKNLGRARDKDMQAVQVAVFFNEPHRTEPSFRSRPFIYDMLAGYGASLAQPA HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC KVVIPENGQGSLGGSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKG EEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHH QVLAQLASQKSASEAWLAGHRSCSYDARHSSQDKRSMHCGVCGNCLLRRVALKWTGIEDT HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC TDYRADDLTATTFEGSFRGIVPRIHKSNHDVAFNSIRAMQRMADLANSPQNTRVATEAAS CCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSRALGEPIQEVRTQLEKFLKQHQTEWSQFLDECGPQSWVADLARN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MNTQLQESHSPAASCSVLLYEHRAPRRANNSIKLKLGDHVRIKAEHIQRYCFVEGDPLQD CCCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEHHHHHHEEEECCCCCHH DLAAVLSGVRMADRACNRQHSKGWARNLNVEVPVYDLCKWQSAEVMGSLTDALRYLTGDQ HHHHHHHHHHHHHHHHCHHHCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCC WHFEFKQRKERPGNSGQAHLVDLPAQERVFMPYSNGLDSFALANQVQRDSSTTELILINV EEEHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEE QAAHRLTNWKNLGRARDKDMQAVQVAVFFNEPHRTEPSFRSRPFIYDMLAGYGASLAQPA HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC KVVIPENGQGSLGGSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNVTVRFEHPALFQTKG EEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHH QVLAQLASQKSASEAWLAGHRSCSYDARHSSQDKRSMHCGVCGNCLLRRVALKWTGIEDT HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC TDYRADDLTATTFEGSFRGIVPRIHKSNHDVAFNSIRAMQRMADLANSPQNTRVATEAAS CCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSRALGEPIQEVRTQLEKFLKQHQTEWSQFLDECGPQSWVADLARN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA