| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787810
Identifier: 91787810
GI number: 91787810
Start: 1992978
End: 1993574
Strand: Reverse
Name: 91787810
Synonym: Bpro_1933
Alternate gene names: NA
Gene position: 1993574-1992978 (Counterclockwise)
Preceding gene: 91787811
Following gene: 91787802
Centisome position: 38.34
GC content: 60.8
Gene sequence:
>597_bases TTGCTGAGTGACTATCTGCCGAGCGGCCAGCCGGTCCTGGACGCCAGCGTCATCATCAACTTGCTCGGCACCAAGGAGCC AGTTGCGATTTTCGATGCTCTTGGACACAAGTGCCTCATCGAGCAGCGAACGTTACGCGAAGTCTGCCGGCACCCTGTTC CCGGCTTACTCGCGGAGCCGGTGCTGGCCGATTTGATATCGCGCGACCTACTTGAGGTGGTCCGGATGACAGACGACGAG TACGAGGTCTATTTGAGCTACGTCTCTCCTCCGCTCGGCACACGGCTAGACGACGGCGAGAGCGCCGCACTGGCCGTGGC TGGCCGCGGTGCCTGCGTTGTCATTGATGAGCGCAGGGCGAGACGCCGAGCGGCAGCAGCGGTTCCCAACATCATTGTTG TGAGCACCCTCCGGCTTGTACTCACGAGCGCACATCGCGCTGGCTGGGGTGCTGCTCGGGCCAAGAGCCTTGTGGAACAA GCGATTCATCACTCGAGGATGGCCGCCCCAAAAGAAGAAGCCGCCCTGTTGGCCAGCCTACTTCAGCCTACTTGGCAGCC AGACCTTCTAGTGACCTGTAACGGAAGAAAGTGGTGA
Upstream 100 bases:
>100_bases CTTTCCGAGCAGCAAATTGCTTCCATGCTAGAGCTGAACCTCGTCGATGTGCGCCAGGCGCTCGAGGAGCACCAGGGGGA TGGGGAGATGGTGCTTGAAC
Downstream 100 bases:
>100_bases ACTTTTCCCTGTGTAGAGCACTTTCGATTCAATCGTTACAGTCCACTAGTCCTTGGTTGATGGGCAAGTACACCTATTTC AGCTCAGACCACCAGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLSDYLPSGQPVLDASVIINLLGTKEPVAIFDALGHKCLIEQRTLREVCRHPVPGLLAEPVLADLISRDLLEVVRMTDDE YEVYLSYVSPPLGTRLDDGESAALAVAGRGACVVIDERRARRRAAAAVPNIIVVSTLRLVLTSAHRAGWGAARAKSLVEQ AIHHSRMAAPKEEAALLASLLQPTWQPDLLVTCNGRKW
Sequences:
>Translated_198_residues MLSDYLPSGQPVLDASVIINLLGTKEPVAIFDALGHKCLIEQRTLREVCRHPVPGLLAEPVLADLISRDLLEVVRMTDDE YEVYLSYVSPPLGTRLDDGESAALAVAGRGACVVIDERRARRRAAAAVPNIIVVSTLRLVLTSAHRAGWGAARAKSLVEQ AIHHSRMAAPKEEAALLASLLQPTWQPDLLVTCNGRKW >Mature_198_residues MLSDYLPSGQPVLDASVIINLLGTKEPVAIFDALGHKCLIEQRTLREVCRHPVPGLLAEPVLADLISRDLLEVVRMTDDE YEVYLSYVSPPLGTRLDDGESAALAVAGRGACVVIDERRARRRAAAAVPNIIVVSTLRLVLTSAHRAGWGAARAKSLVEQ AIHHSRMAAPKEEAALLASLLQPTWQPDLLVTCNGRKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21528; Mature: 21528
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDYLPSGQPVLDASVIINLLGTKEPVAIFDALGHKCLIEQRTLREVCRHPVPGLLAEP CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHH VLADLISRDLLEVVRMTDDEYEVYLSYVSPPLGTRLDDGESAALAVAGRGACVVIDERRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCHHH RRRAAAAVPNIIVVSTLRLVLTSAHRAGWGAARAKSLVEQAIHHSRMAAPKEEAALLASL HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQPTWQPDLLVTCNGRKW HCCCCCCCEEEEECCCCC >Mature Secondary Structure MLSDYLPSGQPVLDASVIINLLGTKEPVAIFDALGHKCLIEQRTLREVCRHPVPGLLAEP CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHH VLADLISRDLLEVVRMTDDEYEVYLSYVSPPLGTRLDDGESAALAVAGRGACVVIDERRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCHHH RRRAAAAVPNIIVVSTLRLVLTSAHRAGWGAARAKSLVEQAIHHSRMAAPKEEAALLASL HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LQPTWQPDLLVTCNGRKW HCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA