| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is queC [H]
Identifier: 91787803
GI number: 91787803
Start: 1986045
End: 1986893
Strand: Direct
Name: queC [H]
Synonym: Bpro_1926
Alternate gene names: 91787803
Gene position: 1986045-1986893 (Clockwise)
Preceding gene: 91787801
Following gene: 91787804
Centisome position: 38.19
GC content: 51.71
Gene sequence:
>849_bases TTGCTACGTTATACCGCAGCACCTTGCGGTATACATTACGTAGGGTCTCAATATCCCAGCTTCCACCAACAACATAAGGA GAGAGAAGTGACCAAAGCTATCGTTGTGTTTTCTGGCGGCCCAGACTCCCTTGCGGCAGCTCTCTGGGCGAAATCAAAAA AGTACGACCCGTGGCTGCTGACTTTCCAGTTTAAGCAGAGGGAACAAGGCGGTGAAATGTTTGCTTCTATGCTCCTAGCG AAGACGCTTGGCTTCCCCCAAGAAATCATCGATTTCAAGTCGCCAATGCATTCATTTGAACCAACCGTTCATGTGCTCAT GCACGCCGGGACGACAACAACCGCTGACCGTGCCCAACACCACCGCATGGAGTTCGGTGCCGGTATGGTCATGGCGACTG CATGTACGTTCGCGGTTTACCACCAAATCGATGATGTCGTTTGGGGAGCAACCAAAGATGATGTCTTTGGAGGACGGTTT GAGTACAGCCAGGAGTTCGCTGACGCTTTTGCAAATCTCGTTTCCTGTACAACTGGTAGGCCGTTTCGCATCCATGTGCC TTTTGCTTCAAAGAGCAAACACCAAGTCTTGGCTGAGTTTTCAGGGAAAGAAGACCTGTTTGCAATGTCGTGGTCCTGTA AAGTCGGCTCAAGTATCCAGTGCGGCACTTGCACGGCATGTGTCGCACGTCGGGTTGCGGCTCAAGCCTCGGGCGTCAAA GACGCCACTAGCTACCACGAACAGAATTACAAGAGCCCGCTATCCGAGGCGCAGATTGCATCACTGGATACGCTGTCCGA TGAAGATCGAGCGCATATCTTCCAAAGCGAGAAGGCTCCAGTTGATTGA
Upstream 100 bases:
>100_bases GAGCAAGCCATTTCTTGCCAGTTGCCGGGTTTGTCGCTATTTTTAATGGAGCAAACAATCCAAGTGAGGCAGGCCTAAAT GCCAGTTTTTTTAGGTCAAG
Downstream 100 bases:
>100_bases GACCCAACCCTGCGTTCCAGCCGACCCGCTACAGCCAGCTTCGCTGGCTTACGCGGTCGGCTGAGCTTGAACGTTATACG GCTGGTGCGTTCCTCACGTG
Product: ExsB
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine synthase; PreQ(0) synthase; Queuosine biosynthesis protein queC [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLRYTAAPCGIHYVGSQYPSFHQQHKEREVTKAIVVFSGGPDSLAAALWAKSKKYDPWLLTFQFKQREQGGEMFASMLLA KTLGFPQEIIDFKSPMHSFEPTVHVLMHAGTTTTADRAQHHRMEFGAGMVMATACTFAVYHQIDDVVWGATKDDVFGGRF EYSQEFADAFANLVSCTTGRPFRIHVPFASKSKHQVLAEFSGKEDLFAMSWSCKVGSSIQCGTCTACVARRVAAQASGVK DATSYHEQNYKSPLSEAQIASLDTLSDEDRAHIFQSEKAPVD
Sequences:
>Translated_282_residues MLRYTAAPCGIHYVGSQYPSFHQQHKEREVTKAIVVFSGGPDSLAAALWAKSKKYDPWLLTFQFKQREQGGEMFASMLLA KTLGFPQEIIDFKSPMHSFEPTVHVLMHAGTTTTADRAQHHRMEFGAGMVMATACTFAVYHQIDDVVWGATKDDVFGGRF EYSQEFADAFANLVSCTTGRPFRIHVPFASKSKHQVLAEFSGKEDLFAMSWSCKVGSSIQCGTCTACVARRVAAQASGVK DATSYHEQNYKSPLSEAQIASLDTLSDEDRAHIFQSEKAPVD >Mature_282_residues MLRYTAAPCGIHYVGSQYPSFHQQHKEREVTKAIVVFSGGPDSLAAALWAKSKKYDPWLLTFQFKQREQGGEMFASMLLA KTLGFPQEIIDFKSPMHSFEPTVHVLMHAGTTTTADRAQHHRMEFGAGMVMATACTFAVYHQIDDVVWGATKDDVFGGRF EYSQEFADAFANLVSCTTGRPFRIHVPFASKSKHQVLAEFSGKEDLFAMSWSCKVGSSIQCGTCTACVARRVAAQASGVK DATSYHEQNYKSPLSEAQIASLDTLSDEDRAHIFQSEKAPVD
Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]
COG id: COG0603
COG function: function code R; Predicted PP-loop superfamily ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018317 - InterPro: IPR014729 [H]
Pfam domain/function: PF06508 ExsB [H]
EC number: NA
Molecular weight: Translated: 31210; Mature: 31210
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYTAAPCGIHYVGSQYPSFHQQHKEREVTKAIVVFSGGPDSLAAALWAKSKKYDPWLL CCEEECCCCCEEECCCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEE TFQFKQREQGGEMFASMLLAKTLGFPQEIIDFKSPMHSFEPTVHVLMHAGTTTTADRAQH EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCEEEEEECCCCCHHHHHHH HRMEFGAGMVMATACTFAVYHQIDDVVWGATKDDVFGGRFEYSQEFADAFANLVSCTTGR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PFRIHVPFASKSKHQVLAEFSGKEDLFAMSWSCKVGSSIQCGTCTACVARRVAAQASGVK CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCH DATSYHEQNYKSPLSEAQIASLDTLSDEDRAHIFQSEKAPVD HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MLRYTAAPCGIHYVGSQYPSFHQQHKEREVTKAIVVFSGGPDSLAAALWAKSKKYDPWLL CCEEECCCCCEEECCCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHCCCCCCCEEE TFQFKQREQGGEMFASMLLAKTLGFPQEIIDFKSPMHSFEPTVHVLMHAGTTTTADRAQH EEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCEEEEEECCCCCHHHHHHH HRMEFGAGMVMATACTFAVYHQIDDVVWGATKDDVFGGRFEYSQEFADAFANLVSCTTGR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PFRIHVPFASKSKHQVLAEFSGKEDLFAMSWSCKVGSSIQCGTCTACVARRVAAQASGVK CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCH DATSYHEQNYKSPLSEAQIASLDTLSDEDRAHIFQSEKAPVD HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA